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samples.@id
/in-vitro-systems/IGVFSM1594ZOQH/
3 items
  • AuxiliarySet
    IGVFDS4621HUKP
    gRNA sequencing
    Jay Shendure, UW
    Summary
    gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
    released
  • MeasurementSet
    IGVFDS7395DPAD
    scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
    Jay Shendure, UW
    Sample Summary
    K562 cell line (cellular sub pool: 10Xlane1), female, Homo sapiens modified with CRISPRa Sp-dCas9-VP64-p65-Rta (VPR), transfected with a guide library
    released
  • principal
    AnalysisSet
    IGVFDS9078ZWQH
    scCRISPR activation screen: differential gene expression quantifications, sparse gene count matrix
    Jay Shendure, UW
    Samples
    K562 cell line, modified with CRISPR modifications, transfected with a guide library
    released