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input_for
/analysis-sets/IGVFDS2018URDY/
4 items
  • MeasurementSet
    IGVFDS1013HCXI
    interference single-nucleus ATAC-seq (10x multiome with MULTI-seq)
    Ansuman Satpathy, Stanford
    Sample Summary
    multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
    released
  • MeasurementSet
    IGVFDS3910GBDQ
    interference single-nucleus ATAC-seq (10x multiome with MULTI-seq)
    Ansuman Satpathy, Stanford
    Sample Summary
    multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
    released
  • MeasurementSet
    IGVFDS9139TBCB
    interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
    Ansuman Satpathy, Stanford
    Sample Summary
    multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
    released
  • MeasurementSet
    IGVFDS2246RAZO
    interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
    Ansuman Satpathy, Stanford
    Sample Summary
    multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
    released