UCI snRNA-seq workflow

audit_analysis_set_multiplexed_samples

audit_file_set_missing_publication

audit_ntr_term_id

audit_item_status

audit_sample_missing_publication

Ali Mortazavi

Center for Mouse Genomic Variation at Single Cell Resolution

8 cube mouse founder strains plate igvf_015 Subpool_UDI27 with Cortex/Hippocampus, Diencephalon/Pituitary, Heart, Liver, Kidney, Gastrocnemius, Adrenal gland, Gonads, PBMC as the tissue

Ali Mortazavi, UCI

Mus musculus multiplexed sample of adrenal gland, epididymis, gastrocnemius, heart, hypothalamus, kidney, left cerebral cortex, left hippocampal formation, liver, ovary, oviduct, peripheral blood mononuclear cell, pituitary gland, testis

multiplexed sample: Mus musculus B6(SJL)-Trem2<em1Aduci>/J (female, 65 days) hypothalamus tissue; Mus musculus B6(SJL)-Trem2<em1Aduci>/J (male, 69 days) liver tissue; ... and 94 more samples

Parse SPLiT-seq: sparse gene count matrix

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Measured Mechanism

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Simplified Sample Summary

Samples

Sample Institutional Certificates

Sample Summary

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

Object Type

Classification

Sample

File Type

File Format

Data Use Limitation

Audit Category: Internal Action

input_file_sets.@id

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