igvf single cell uniform pipeline

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Jason Buenrostro

A foundational resource of functional elements, TF footprints and gene regulatory interactions

Jason Buenrostro, Broad

Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Controlled Access

Data Use Limitation Summaries

Description

Donors

Taxa

File Set Type

File Type

Measured Mechanism

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Simplified Sample Summary

Samples

Sample Institutional Certificates

Sample Summary

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

Object Type

Classification

Sample

File Format

Data Use Limitation

Audit category: NOT COMPLIANT

Audit category: WARNING

Audit Category: Internal Action

input_file_sets.@id

Search

File Set Type

Taxa

Classification

Sample

File Type

File Format

Data Use Limitation

Lab

Award

Status

Audit Not Compliant

Audit Warning

input_file_sets.@id