audit_input_file_sets_derived_from

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audit_item_status

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audit_analysis_set_files_missing_analysis_step_version

Jesse Engreitz

Stanford Center for Connecting DNA Variants to Function and Phenotype

Analysis of PPIF promoter 5-bp tiling mutagenesis edit effects on PPIF expression that were measured by Variant-FlowFISH in THP-1 cells.

Jesse Engreitz, Stanford

THP-1 cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of PPIF

THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-25% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 26-50% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 51-75% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

prime editing Variant FlowFISH targeting PPIF: variant effects

Accession

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Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Functional Assay Mechanisms

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Measurement Sets

Model Name

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Preferred Assay Title

Protocols

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Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

FileSet

File Set

Provenance

File Data

Quality

Object Type

Available File Types

Audit category: ERROR

Audit category: NOT COMPLIANT

Audit category: WARNING

Audit Category: Internal Action

input_file_sets.@id

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