Satpathy Cell Ranger

audit_item_status

audit_analysis_set_multiplexed_samples

Jesse Engreitz

Stanford Center for Connecting DNA Variants to Function and Phenotype

Quality-control workflow performed by Satpathy Lab - U2OS, HAP1, HL60, K562, and HUDEP2

Ansuman Satpathy, Stanford

HUDEP-2, HAP-1, U2OS, K562, HL-60 cell line and multiplexed sample

multiplexed sample: HAP-1 cell line, male, Homo sapiens; HAP-1 cell line, male, Homo sapiens; ... and 13 more samples

10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Measured Mechanism

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Sample Summary

Samples

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

FileSet

File Set

Sample

Files

Provenance

Quality

Object Type

Classification

File Type

File Format

Audit Category: Internal Action

input_file_sets.@id

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