Hon Perturb-seq Workflow

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Gary Hon

Multiscale functional characterization of genomic variation in human developmental disorders

Gary Hon, UT

Homo sapiens H9 differentiated cell specimen induced to cardiac muscle cell, at 12 day(s) post change, modified with CRISPRi Sp-dCas9, transfected with a guide library

Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW275) modified with CRISPRi Sp-dCas9, 3 week(s) after transfection with a guide library

Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW276) modified with CRISPRi Sp-dCas9, 3 week(s) after transfection with a guide library

Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW274) modified with CRISPRi Sp-dCas9, 3 week(s) after transfection with a guide library

Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW273) modified with CRISPRi Sp-dCas9, 3 week(s) after transfection with a guide library

interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Measured Mechanism

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Simplified Sample Summary

Samples

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

FileSet

File Set

Sample

Files

Provenance

Quality

Object Type

Construct Library Data

Classification

Cellular Transformation Target

Modification

File Type

File Format

Construct Library Design

Audit category: NOT COMPLIANT

Audit Category: Internal Action

input_file_sets.@id

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