UCI snRNA-seq workflow

audit_sample_missing_publication

audit_analysis_set_multiplexed_samples

audit_file_set_missing_publication

Ali Mortazavi

Center for Mouse Genomic Variation at Single Cell Resolution

8 cube founder strain analysis for liver tissue

Ali Mortazavi, UCI

Mus musculus multiplexed sample of heart, hypothalamus, liver, pituitary gland

multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

audit_ntr_term_id

8 cube founder strain analysis for diencephalon and pituitary tissues

Mus musculus multiplexed sample of adrenal gland, epididymis, gastrocnemius, heart, hypothalamus, left cerebral cortex, left hippocampal formation, liver, ovary, oviduct, pituitary gland, testis

multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 254 more samples

multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) heart tissue; Mus musculus NZO/H1LtJ (female, 69 days) left cerebral cortex tissue; ... and 12 more samples

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Controlled Access

Data Use Limitation Summaries

Description

Donors

Taxa

File Set Type

File Type

Measured Mechanism

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Simplified Sample Summary

Samples

Sample Institutional Certificates

Sample Summary

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

Object Type

Classification

Sample

File Format

Data Use Limitation

Audit Category: Internal Action

input_file_sets.@id

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