UCI snRNA-seq workflow

audit_ntr_term_id

audit_analysis_set_multiplexed_samples

Ali Mortazavi

Center for Mouse Genomic Variation at Single Cell Resolution

Lab processed snRNA-seq gene counts with clusters and cell type annotations for IGVF C57BL/6J and Castaneus left cortex bridge samples

Ali Mortazavi, UCI

multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples

Parse SPLiT-seq: sparse gene count matrix

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Functional Assay Mechanisms

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Sample Summary

Samples

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

FileSet

File Set

Sample

Files

Provenance

Quality

Object Type

Classification

File Type

File Format

Audit category: WARNING

Audit Category: Internal Action

input_file_sets.@id

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