MPRAnalyze Variant Annotation

Jay Shendure

Massively parallel characterization of variants and elements impacting transcriptional regulation in dynamic cellular systems

Nadav Ahituv, UCSF

neural progenitor cell pooled cell specimen, transfected with a reporter library

neural progenitor pooled cell specimen, Homo sapiens transfected with a reporter library

lentiMPRA: reporter genomic variant effects

Accession

Aliases

Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Measured Mechanism

Input File Sets

Measurement Sets

Model Name

Prediction Objects

Preferred Assay Title

Protocols

Sample Summary

Samples

Prediction Scope

Selection Criteria

Sequencing Library Types

Genes

Status

Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

FileSet

File Set

Sample

Files

Provenance

Quality

Object Type

Classification

File Type

File Format

input_file_sets.@id

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