IGVF

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Content Type

reads
240
MPRA sequence designs
1
barcode to element mapping
1

File Format

fastq
240
tsv
2

Sequencing Platform

Illumina NextSeq 500
144
Illumina NextSeq 2000
96

/tabular-files/IGVFFI0292XWJM/

242 items

SequenceFile
IGVFFI7164IWPZ
fastq - reads - R3
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI3742VHYN
fastq - reads - R2
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI5412BQXP
fastq - reads - R1
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI2769TXAA
fastq - reads - R3
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI4930EVFR
fastq - reads - R3
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI1666ZOWK
fastq - reads - R1
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI8548MIAL
fastq - reads - R1
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI4135CDDC
fastq - reads - R1
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI4092ZSXR
fastq - reads - R2
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI5101QWMQ
fastq - reads - R2
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6593GEZP
fastq - reads - R2
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI9830KTIJ
fastq - reads - R3
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI3452FMVQ
fastq - reads - R3
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI5392VALW
fastq - reads - R1
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI1882DSCA
fastq - reads - R1
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI4334ZQRM
fastq - reads - R1
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6724RUYY
fastq - reads - R3
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI4024EDSM
fastq - reads - R3
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI1209ULWP
fastq - reads - R2
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI7919FFPL
fastq - reads - R3
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI7161ZVFV
fastq - reads - R2
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI8492STOX
fastq - reads - R1
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI1218OSBH
fastq - reads - R3
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI7432PTRM
fastq - reads - R1
Jay Shendure, UW
File Set
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6569RCPX
fastq - reads - R3
Jay Shendure, UW
File Set
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
released
validated