IGVF

/

SequenceFile

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Content Type

reads
739
Nanopore reads
11

File Format

fastq
739
pod5
11

Illumina Read Type

R1
3607
R2
3517
I1
3309
I2
3134
R3
80

Sequencing Platform

Illumina HiSeq 2500
726
ONT GridION X5
20
ONT PromethION 2 Solo
2
Illumina NextSeq 550
1
ONT PromethION
1

Sequencing Kit

ONT Ligation Sequencing Kit V14
23

Illumina Read Type

750 items

SequenceFile
IGVFFI1340BULZ
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI3469NFLH
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI3941EFFB
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI3163PWLN
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI9001JJGS
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in 36 genomic loci
released
validated
SequenceFile
IGVFFI1703SUAL
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI2143VXMF
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6854ADBG
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI5281RKUY
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6782WVEI
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6676HNDS
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI9113CILL
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6628WMUK
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI7926SPBK
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI0393VYGB
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6659FRJR
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI2821MABS
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI0717FWTC
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI5042RRSN
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI9935UOGM
fastq - reads
Ali Mortazavi, UCI
File Set
Parse SPLiT-seq
released
validated
SequenceFile
IGVFFI0642YKDD
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI9695GFTP
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6772UIRN
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
released
validated
SequenceFile
IGVFFI6104EBTD
fastq - reads
Jesse Engreitz, Stanford
File Set
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in 36 genomic loci
released
validated
SequenceFile
IGVFFI2783NHJJ
pod5 - Nanopore reads
Ali Mortazavi, UCI
File Set
Parse SPLiT-seq
released
validated