IGVF

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/analysis-sets/IGVFDS8415FVDT/

6 items

MatrixFile
IGVFFI0475WSGO
h5ad - cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
Content Summary
cell by gene in sparse gene count matrix
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
MatrixFile
IGVFFI9244EOEO
tar - cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
Content Summary
cell by gene in comprehensive gene count matrix
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
IndexFile
IGVFFI7184SQPW
index of IGVFFI1836KEVI
Jason Buenrostro, Broad
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
IndexFile
IGVFFI8732KRQE
index of IGVFFI9954EGHG
Jason Buenrostro, Broad
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
TabularFile
IGVFFI1836KEVI
bed - fragments - GRCm39
Jason Buenrostro, Broad
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
AlignmentFile
IGVFFI9954EGHG
bam - unfiltered alignments - GRCm39
Jason Buenrostro, Broad
Content Summary
unfiltered alignments
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated