IGVF

Click and hold a term momentarily to select items without that term.

Content Type

filtered feature barcode matrix
1
raw feature barcode matrix
1
sparse gene count matrix
1
unfiltered global differential expression
1
unfiltered local differential expression
1

File Format

csv
2
h5ad
1
hdf5
1
pkl
1

/analysis-sets/IGVFDS7340YDHF/

5 items

MatrixFile
IGVFFI7586HWIH
hdf5 - cell by UMI count in filtered feature barcode matrix
Gary Hon, UT
Content Summary
cell by UMI count in filtered feature barcode matrix
File Set
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
preview
validated
TabularFile
IGVFFI3020CFIL
csv - unfiltered local differential expression
Gary Hon, UT
File Set
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
preview
invalidated
MatrixFile
IGVFFI5102YSIV
pkl - cell by CRISPR guide capture in raw feature barcode matrix
Gary Hon, UT
Content Summary
cell by CRISPR guide capture in raw feature barcode matrix
File Set
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
preview
validated
MatrixFile
IGVFFI4463LVNM
h5ad - cell by gene expression in sparse gene count matrix
Gary Hon, UT
Content Summary
cell by gene expression in sparse gene count matrix
File Set
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
preview
validated
TabularFile
IGVFFI5883SVNN
csv - unfiltered global differential expression
Gary Hon, UT
File Set
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
preview
invalidated