IGVF

Click and hold a term momentarily to select items without that term.

/analysis-sets/IGVFDS4372ZZVR/

5 items

MatrixFile
IGVFFI8511XOAV
hdf5 - cell by gene in raw feature barcode matrix
Ansuman Satpathy, Stanford
Content Summary
cell by gene in raw feature barcode matrix
AnalysisSe
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
IndexFile
IGVFFI3597DRNP
index of IGVFFI4651ZHFR
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI4651ZHFR
tsv - fragments
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI1896JFVN
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI6306WEEJ
bed - peaks - GRCh38
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted