IGVF

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/analysis-sets/IGVFDS3457PPSX/

5 items

TabularFile
IGVFFI9112WEDK
bed - peaks - GRCh38
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
TabularFile
IGVFFI8360SRWO
tsv - fragments
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validation exempted
IndexFile
IGVFFI3180EJTY
index of IGVFFI8360SRWO
Ansuman Satpathy, Stanford
AnalysisSe
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
TabularFile
IGVFFI0707ZMKE
tsv - cell hashing barcodes
Ansuman Satpathy, Stanford
AnalysisSe
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated
MatrixFile
IGVFFI7718TGMZ
hdf5 - cell by gene in raw feature barcode matrix
Ansuman Satpathy, Stanford
Content Summary
cell by gene in raw feature barcode matrix
AnalysisSe
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
released
validated