IGVF

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/analysis-sets/IGVFDS2500WRRQ/

6 items

AlignmentFile
IGVFFI3872NBHI
bam - unfiltered alignments - GRCm39
Jason Buenrostro, Broad
Content Summary
unfiltered alignments
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
IndexFile
IGVFFI6822VPWM
index of IGVFFI5042DAMZ
Jason Buenrostro, Broad
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
TabularFile
IGVFFI5042DAMZ
bed - fragments - GRCm39
Jason Buenrostro, Broad
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
MatrixFile
IGVFFI8092YGSW
h5ad - cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
Content Summary
cell by gene in sparse gene count matrix
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
MatrixFile
IGVFFI8561TMDO
tar - cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
Content Summary
cell by gene in comprehensive gene count matrix
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated
IndexFile
IGVFFI6789PURJ
index of IGVFFI3872NBHI
Jason Buenrostro, Broad
AnalysisSe
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
released
validated