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ID
Accession
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Alternate Accessions
Assemblies
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Controlled Access
Data Use Limitation Summaries
Description
Donors
File Set Type
Lab
Samples
Status
Summary
Taxa
Transcriptome Annotations
UUID
/curated-sets/IGVFDS4399AIVC/
IGVFDS4399AIVC
tim-reddy:starr-seq-variants-curated-set-P0020
GRCh38
/awards/HG012053/
/human-donors/IGVFDO5906JTNO/
,
/human-donors/IGVFDO2586HOGZ/
,
/human-donors/IGVFDO8538NJBT/
,
/human-donors/IGVFDO7628YVDD/
,
/human-donors/IGVFDO8345WLMS/
variants
/labs/tim-reddy/
released
Homo sapiens GRCh38 variants
Homo sapiens
ff53b2d6-8ce6-40ac-b39a-9026efc10103
/curated-sets/IGVFDS3190PUWD/
IGVFDS3190PUWD
igvf:10X_Multiome_ATAC_cell_barcode_inclusion_list_fileset
/awards/Community/
10X Multiome ATAC cell barcode inclusion list
barcodes
/labs/community/
released
barcodes
fd60d197-3dd4-49bb-9493-0d237ec82007
/curated-sets/IGVFDS7560LHAC/
IGVFDS7560LHAC
/awards/HG012077/
Barcode to tissue sample mapping
barcodes
/labs/ali-mortazavi/
released
Mus musculus barcodes
Mus musculus
fccb8124-6df5-4c05-8b29-ea310475ceec
/curated-sets/IGVFDS0056MEON/
IGVFDS0056MEON
igvf:igvf_catalog_beta_v0.1_adastra_allele_specific_binding
GRCh38
/awards/Community/
ADASTRA allele-specific binding events
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
f981e985-56b9-41ce-bfa1-ee00f7cdaee9
/curated-sets/IGVFDS5567DYYY/
IGVFDS5567DYYY
jesse-engreitz:guidedeisgn_CRUDO_TAPseq
GRCh38
/awards/HG011972/
guide RNAs
/labs/jesse-engreitz/
released
Homo sapiens GRCh38 guide RNAs
Homo sapiens
f43270c5-51c6-4e51-a7d8-82a15d89322c
/curated-sets/IGVFDS5898ZDNL/
IGVFDS5898ZDNL
igvf:igvf_catalog_beta_v0.1_ensembl_genes
GRCh38
/awards/Community/
ENSEMBL genes with NCBI alias mappings
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
f327cbb3-d3c8-47b3-b3f1-aaf06603cf30
/curated-sets/IGVFDS3146OKJO/
IGVFDS3146OKJO
ansuman-satpathy:curated_set_barcode_map_igvf4
/awards/HG012076/
barcodes
/labs/ansuman-satpathy/
released
barcodes
f2b71fce-175e-429a-8e10-f9f7530b579f
/curated-sets/IGVFDS8678JUTA/
IGVFDS8678JUTA
igvf:igvf_catalog_beta_v0.1_uniprot
GRCh38
/awards/Community/
Human Uniprot proteins
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
ee77b5f8-8db9-41f8-8d7f-6eda9bb219d9
/curated-sets/IGVFDS9739IIFE/
IGVFDS9739IIFE
hg19
/awards/HG011966/
elements
/labs/nadav-ahituv/
released
hg19 elements
ede44cb3-658a-45f2-9d1e-54b3ced3359a
/curated-sets/IGVFDS5645BMIY/
IGVFDS5645BMIY
igvf:igvf_catalog_beta_v0.1_mouse_encode_ccre
GRCm39, mm10
/awards/ENCODE/
Mouse ENCODE cCRE
external data for catalog
/labs/encode/
released
Mus musculus GRCm39 mm10 external data for catalog
Mus musculus
eb9bad34-9bb4-4ab2-b3c6-da3ab10b6228
/curated-sets/IGVFDS3092YVWN/
IGVFDS3092YVWN
/awards/HG012077/
Barcode to tissue sample mapping
barcodes
/labs/ali-mortazavi/
released
Mus musculus barcodes
Mus musculus
e9124b84-c51c-4aa8-a266-be1b9d5456b0
/curated-sets/IGVFDS1193SOYF/
IGVFDS1193SOYF
igvf:igvf_catalog_beta_v0.1_orphanet
GRCh38
/awards/Community/
Orphanet disease genes collection
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
e4190fda-a9d0-4991-af77-22ce809f24be
/curated-sets/IGVFDS8984VRSC/
IGVFDS8984VRSC
/awards/HG012077/
Barcode to tissue sample mapping
barcodes
/labs/ali-mortazavi/
released
Mus musculus barcodes
Mus musculus
e2cc6aa5-d8cd-4896-b3fa-9c7cec2e0d37
/curated-sets/IGVFDS3617ZQSK/
IGVFDS3617ZQSK
tim-reddy:starr-seq-variants-curated-set-P0014
GRCh38
/awards/HG012053/
/human-donors/IGVFDO9920DSXX/
,
/human-donors/IGVFDO1370RSQS/
,
/human-donors/IGVFDO1762SMXW/
,
/human-donors/IGVFDO4302ZICD/
,
/human-donors/IGVFDO2535IHBP/
variants
/labs/tim-reddy/
released
Homo sapiens GRCh38 variants
Homo sapiens
e1a2bd0b-479a-4d15-b3ad-2ede06787b86
/curated-sets/IGVFDS8165ZEAM/
IGVFDS8165ZEAM
tim-reddy:starr-seq-variants-curated-set-P0015
GRCh38
/awards/HG012053/
/human-donors/IGVFDO2179WELL/
,
/human-donors/IGVFDO9384CGII/
,
/human-donors/IGVFDO9657IGUF/
,
/human-donors/IGVFDO6734BBSB/
,
/human-donors/IGVFDO4761QUVY/
variants
/labs/tim-reddy/
released
Homo sapiens GRCh38 variants
Homo sapiens
e100680e-f3ab-4529-9775-72afc5b46aae
/curated-sets/IGVFDS0756KPYR/
IGVFDS0756KPYR
igvf:igvf_catalog_beta_v0.1_encode_v4_cell_type_agnostic_ccres
GRCh38
/awards/Community/
ENCODE v4 cell-type agnostic cCREs
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
df98ec1d-4060-42c1-b015-e5ccaa93d466
/curated-sets/IGVFDS6983MMSZ/
IGVFDS6983MMSZ
jesse-engreitz:curated_NOS3_CRISPRi_FF
GRCh38
/awards/HG011972/
guide RNAs
/labs/jesse-engreitz/
released
Homo sapiens GRCh38 guide RNAs
Homo sapiens
df271843-8b4e-417b-827b-60baadc510f5
/curated-sets/IGVFDS8793NHEL/
IGVFDS8793NHEL
igvf:igvf_catalog_beta_v0.1_encode_mpra
GRCh38
/awards/ENCODE/
MPRA tested regulatory elements
external data for catalog
/labs/encode/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
db63a466-ff76-4688-ac06-7670178bf97f
/curated-sets/IGVFDS3257FDZW/
IGVFDS3257FDZW
igvf:igvf_catalog_beta_v0.1_go_annotations
/awards/Community/
Human GO annotations (GO term->gene links)
external data for catalog
/labs/community/
released
Homo sapiens external data for catalog
Homo sapiens
d759ec85-f4b3-4242-92ea-7e83ebf9a111
/curated-sets/IGVFDS9088SLTK/
IGVFDS9088SLTK
igvf:igvf_catalog_beta_v0.1_orphanet_ontologies
GRCh38
/awards/Community/
ORPHANET ontologies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d222dec3-d728-45ac-b145-25f7c50f1356
/curated-sets/IGVFDS0684CZUK/
IGVFDS0684CZUK
igvf:hs-chromap-genome-index-set
GRCh38
/awards/Community/
human chromap genome index
genome
/labs/community/
released
Homo sapiens GRCh38 genome
Homo sapiens
d12fc0e7-b347-43a1-b08f-569e62f67088
/curated-sets/IGVFDS1759WTEV/
IGVFDS1759WTEV
igvf:igvf_catalog_beta_v0.3_Y2AVE_project
GRCh38
/awards/Community/
Y2AVE variants
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d0982256-06a8-4839-9356-ddcc4ebf28aa
/curated-sets/IGVFDS9885PKLH/
IGVFDS9885PKLH
igvf:igvf_catalog_mouse_variants_and_strains
GRCm39
/awards/Community/
mouse variants and strains
external data for catalog
/labs/community/
released
Mus musculus GRCm39 external data for catalog
Mus musculus
d0346fe3-38c5-4a2c-875d-3e9cd8d2b12d
/curated-sets/IGVFDS0491JHHV/
IGVFDS0491JHHV
igvf:igvf_catalog_beta_v0.1_UKB-PPP_gwas_studies
GRCh38
/awards/Community/
UKB-PPP gwas studies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c82d69ac-5c36-442b-a960-b411c76458de
/curated-sets/IGVFDS9934ZYJM/
IGVFDS9934ZYJM
igvf:igvf_catalog_beta_v0.1_gtex_eqtls
GRCh38
/awards/Community/
GTEx eQTLs
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c7e2176c-e10f-4d53-bb63-45e8778d17c2