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File Set Type

Assay

338 items
IGVFDS8473JDSO
  • jay-shendure:dev_CRE_mEBs_repB_bulk_DNA_day4_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS3120IRAP
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin6hrs-FF1-BinC-PCR1-Rep1_S243
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin6hrs-FF1-BinC-PCR2-Rep1_S249
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin6hrs-FF1-BinC-PCR3-Rep1_S285
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin6hrs-FF1-BinC-PCR4-Rep1_S291
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS5688OXJC
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF2-BinC-PCR1_S15
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF2-BinC-PCR2_S21
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF2-BinC-PCR3_S111
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF2-BinC-PCR4_S117
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS9693EKGR
  • charles-gersbach:cd8-tcells-auxiliary-set-crispri-ccr7-low-bin-rep1
gRNA sequencing
released
gRNA sequencing for CRISPR interference FACS screen integrating a guide (sgRNA) library targeting transcription start sites in many genes
IGVFDS8746LSXO
  • jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day4_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS6678UHIV
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR1_Rep1_S138
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR1_Rep2_S193
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR2_Rep1_S144
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR2_Rep2_S199
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR3_Rep1_S150
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR3_Rep2_S205
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR4_Rep1_S156
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinD-PCR4_Rep2_S211
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS0241XMRI
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinD-PCR1-Rep1_S4
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinD-PCR2-Rep1_S10
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinD-PCR3-Rep1_S58
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinD-PCR4-Rep1_S64
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS8375BGSZ
  • jesse-engreitz:auxiliary_CRUDO_PILOT_CCND1-Auxin0hrs-FF1-BinB-PCR1_S74
  • jesse-engreitz:auxiliary_CRUDO_PILOT_CCND1-Auxin0hrs-FF1-BinB-PCR2_S170
  • jesse-engreitz:auxiliary_CRUDO_PILOT_CCND1-Auxin0hrs-FF1-BinB-PCR3_S266
  • jesse-engreitz:auxiliary_CRUDO_PILOT_CCND1-Auxin0hrs-FF1-BinB-PCR4_S362
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in 36 genomic loci
IGVFDS7833JNUC
  • jesse-engreitz:auxiliary_sortparams_CRUDO_FAM3C_Auxin0hrs-FF1
cell sorting
released
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
IGVFDS7078DXDI
  • jesse-engreitz:auxiliary_NOS3_CRISPRi_FF_R1_FFrep1_binD_PCR2_S196
gRNA sequencing
released
gRNA sequencing for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting sequence variants, transcription start sites in NOS3
IGVFDS5620SSUW
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinC-PCR1-Rep1_S3
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinC-PCR2-Rep1_S9
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinC-PCR3-Rep1_S57
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF1-BinC-PCR4-Rep1_S63
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS1380VYWN
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinB-PCR1-Rep1_S26
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinB-PCR2-Rep1_S32
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinB-PCR3-Rep1_S80
  • jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinB-PCR4-Rep1_S86
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS2370ZRIR
  • jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day12_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS6547DKWF
  • charles-gersbach:cd8-tcells-auxiliary-set-crispri-ccr7-high-bin-rep2
gRNA sequencing
released
gRNA sequencing for CRISPR interference FACS screen integrating a guide (sgRNA) library targeting transcription start sites in many genes
IGVFDS8917HRRE
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR1_S3
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR2_S9
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR3_S99
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR4_S105
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS9560OPMR
  • jesse-engreitz:auxiliary_NOS3_CRISPRi_FF_R1_FFrep1_binB_PCR1_S114
gRNA sequencing
released
gRNA sequencing for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting sequence variants, transcription start sites in NOS3
IGVFDS9816UKEE
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinC-PCR1-Rep1_S219
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinC-PCR2-Rep1_S225
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinC-PCR3-Rep1_S261
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinC-PCR4-Rep1_S267
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS0078EAAP
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR1_S66
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR2_S72
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR3_S162
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR4_S168
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS3480ASIH
  • jay-shendure:dev_CRE_mEBs_repB_bulk_DNA_day14_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS3348ANJX
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR1-Rep1_S218
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR2-Rep1_S224
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR3-Rep1_S260
  • jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR4-Rep1_S266
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS1008MWKE
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR1_S62
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR2_S68
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR3_S158
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR4_S164
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS0020GFXZ
  • jesse-engreitz:auxiliary_NOS3_CRISPRi_FF_R2_FFrep2_binD_PCR2_S220
gRNA sequencing
released
gRNA sequencing for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting sequence variants, transcription start sites in NOS3
IGVFDS5616WTVS
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF4-BinF-PCR1_S90
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF4-BinF-PCR2_S96
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF4-BinF-PCR3_S186
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin6hrs-FF4-BinF-PCR4_S192
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS3139RYUI
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR1_Rep1_S27
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR1_Rep2_S82
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR2_Rep1_S33
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR2_Rep2_S88
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR3_Rep1_S39
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR3_Rep2_S94
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR4_Rep1_S45
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin0hrs-FF2-BinC-PCR4_Rep2_S100
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
IGVFDS9728LNRU
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR1_Rep1_S111
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR1_Rep2_S166
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR2_Rep1_S117
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR2_Rep2_S172
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR3_Rep1_S123
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR3_Rep2_S178
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR4_Rep1_S129
  • jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF1-BinA-PCR4_Rep2_S184
gRNA sequencing
released
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci