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Status
released
158 items
IGVFDS3265EOGA
  • ansuman-satpathy:multiseq_igvf16_10x2
/human-donors/IGVFDO8129UUAA/, /human-donors/IGVFDO1221XJAX/, /human-donors/IGVFDO5729MXSO/, /human-donors/IGVFDO8893DMFF/, /human-donors/IGVFDO0720ONIQ/, /human-donors/IGVFDO4876ENMD/, /human-donors/IGVFDO2620HPCX/, /human-donors/IGVFDO9617JBWJ/, /human-donors/IGVFDO4134ZWBU/, /human-donors/IGVFDO2718IDDQ/, /human-donors/IGVFDO2750DZPB/, /human-donors/IGVFDO4001VEAC/, /human-donors/IGVFDO8977PNMK/, /human-donors/IGVFDO9904ZSML/, /human-donors/IGVFDO7650ICPB/, /human-donors/IGVFDO0183MFIP/, /human-donors/IGVFDO7813GMND/, /human-donors/IGVFDO0324ZSAY/, /human-donors/IGVFDO1038DAII/, /human-donors/IGVFDO8129FWUV/, /human-donors/IGVFDO9716HDYX/, /human-donors/IGVFDO2650AGWB/, /human-donors/IGVFDO2817PSCX/, /human-donors/IGVFDO5614PTYQ/, /human-donors/IGVFDO5656YCPC/, /human-donors/IGVFDO6441FSJH/, /human-donors/IGVFDO5261UCLF/, /human-donors/IGVFDO1964RNHE/, /human-donors/IGVFDO1364EAZP/, /human-donors/IGVFDO6638HIAD/, /human-donors/IGVFDO4532PFAJ/, /human-donors/IGVFDO2492CCQG/, /human-donors/IGVFDO7140TLQJ/, /human-donors/IGVFDO7670TOWV/, /human-donors/IGVFDO4452ZQSF/, /human-donors/IGVFDO2379DTAU/, /human-donors/IGVFDO7725MEWB/, /human-donors/IGVFDO7470LCGC/, /human-donors/IGVFDO8315PGTI/, /human-donors/IGVFDO2965ZTUG/, /human-donors/IGVFDO6169GISQ/, /human-donors/IGVFDO0657EMJH/, /human-donors/IGVFDO3755LIBB/, /human-donors/IGVFDO6162MIWK/
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS8473JDSO
  • jay-shendure:dev_CRE_mEBs_repB_bulk_DNA_day4_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS8561MVXS
  • ansuman-satpathy:multiseq_igvf16_10x4
/human-donors/IGVFDO4001VEAC/, /human-donors/IGVFDO2718IDDQ/, /human-donors/IGVFDO2620HPCX/, /human-donors/IGVFDO8315PGTI/, /human-donors/IGVFDO8129UUAA/, /human-donors/IGVFDO6169GISQ/, /human-donors/IGVFDO4876ENMD/, /human-donors/IGVFDO6441FSJH/, /human-donors/IGVFDO9617JBWJ/, /human-donors/IGVFDO2817PSCX/, /human-donors/IGVFDO1364EAZP/, /human-donors/IGVFDO0324ZSAY/, /human-donors/IGVFDO5729MXSO/, /human-donors/IGVFDO2750DZPB/, /human-donors/IGVFDO7813GMND/, /human-donors/IGVFDO0720ONIQ/, /human-donors/IGVFDO2379DTAU/, /human-donors/IGVFDO5656YCPC/, /human-donors/IGVFDO8977PNMK/, /human-donors/IGVFDO4134ZWBU/, /human-donors/IGVFDO5261UCLF/, /human-donors/IGVFDO7650ICPB/, /human-donors/IGVFDO0657EMJH/, /human-donors/IGVFDO2650AGWB/, /human-donors/IGVFDO1221XJAX/, /human-donors/IGVFDO7725MEWB/, /human-donors/IGVFDO8893DMFF/, /human-donors/IGVFDO6638HIAD/, /human-donors/IGVFDO2492CCQG/, /human-donors/IGVFDO3755LIBB/, /human-donors/IGVFDO7470LCGC/, /human-donors/IGVFDO7670TOWV/, /human-donors/IGVFDO4452ZQSF/, /human-donors/IGVFDO0183MFIP/, /human-donors/IGVFDO9716HDYX/, /human-donors/IGVFDO2965ZTUG/, /human-donors/IGVFDO8129FWUV/, /human-donors/IGVFDO1038DAII/, /human-donors/IGVFDO1964RNHE/, /human-donors/IGVFDO5614PTYQ/, /human-donors/IGVFDO6162MIWK/, /human-donors/IGVFDO9904ZSML/, /human-donors/IGVFDO4532PFAJ/, /human-donors/IGVFDO7140TLQJ/
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS8746LSXO
  • jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day4_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS7833JNUC
  • jesse-engreitz:auxiliary_sortparams_CRUDO_FAM3C_Auxin0hrs-FF1
cell sorting
released
cell sorting for mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen sorted on the expression of FAM3C integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
IGVFDS2370ZRIR
  • jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day12_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS3480ASIH
  • jay-shendure:dev_CRE_mEBs_repB_bulk_DNA_day14_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS5693MIIK
  • ansuman-satpathy:multiseq_igvf3_10x3
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS2965JJYR
  • jay-shendure:dev_CRE_mEBs_repB_bulk_DNA_day16_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS9108NLTS
  • charles-gersbach:cd8-tcells-perturb-seq-crispra-grna-rep1
gRNA sequencing
released
gRNA sequencing for CRISPR activation Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes
IGVFDS4882ESVG
  • ansuman-satpathy:multiseq_igvf0_10x1
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS6028VFBK
  • jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day0_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS1549RKIJ
  • jesse-engreitz:auxiliary_sortparams_CRUDO_CCND1_Auxin0hrs-FF2
cell sorting
released
cell sorting for mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen sorted on the expression of CCND1 integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
IGVFDS7792HFAY
  • jay-shendure:dev_CRE_mEBs_oBC_repA_10Xlane1_reads
circularized RNA barcode detection
released
circularized RNA barcode detection for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS7168JGPF
  • jay-shendure:dev_CRE_mEBs_mBC_repB_10Xlane1_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS9737EJUL
  • ansuman-satpathy:multiseq_igvf13_10x3
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
IGVFDS3935KLZM
  • jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_DNA_day8_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS2989BOYC
  • jay-shendure:dev_CRE_mEBs_rep2B_part2_bulk_DNA_day6_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS2891PUQE
  • ansuman-satpathy:multiseq_igvf11_10x3
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS5763YUNI
  • ansuman-satpathy:multiseq_igvf17_10x4
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
IGVFDS2532AVSC
  • jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane3_CS1
gRNA sequencing
released
gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
IGVFDS3729YOSL
  • jay-shendure:dev_CRE_mEBs_repA_bulk_DNA_day6_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
IGVFDS2143LCWD
  • ansuman-satpathy:multiseq_igvf13_10x2
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS6940QNAZ
  • ansuman-satpathy:multiseq_igvf4_10x2
lipid-conjugated oligo sequencing
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
IGVFDS7645MEIE
  • jay-shendure:dev_CRE_mEBs_mBC_rep2B_10Xlane2_reads
quantification DNA barcode sequencing
released
quantification DNA barcode sequencing for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci