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File Set Type
Taxa
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Sample
File Type
File Format
Controlled Access
Data Use Limitation
Lab
Award
Status
Externally Hosted
samples.@id
samples.@id
/multiplexed-samples/IGVFSM4662QKFQ/
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25 Items
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4 items
ID
Accession
Aliases
Alternate Accessions
Assay
Assay
Controlled Access
Data Use Limitation Summaries
Donors
File Assembly
File Content Type
File Format
File Set Type
Lab
Measurement Sets
Preferred Assay Title
Sample Institutional Certificates
Sample Summary
Samples
Simplified Sample Summary
Status
Summary
/measurement-sets/IGVFDS3744SQTD/
IGVFDS3744SQTD
ansuman-satpathy:snRNA-seq_igvf1_10x1
single-nucleus RNA sequencing assay
false
No limitations
/human-donors/IGVFDO2722UPGC/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO2115EOOA/
,
/human-donors/IGVFDO0965QSBA/
,
/human-donors/IGVFDO9571CSNU/
reads, seqspec
experimental data
/labs/ansuman-satpathy/
10x multiome with MULTI-seq
/institutional-certificates/16883984-b168-4b68-bc2a-37ef58354571/
,
/institutional-certificates/53fbaed7-f4c0-4932-bf77-254568743089/
,
/institutional-certificates/5e0fa625-6c72-4f32-872e-bcbc6acf630b/
,
/institutional-certificates/8ef1d59e-ef62-4890-b0ea-086d37645c75/
,
/institutional-certificates/d997512b-2c33-48e5-ae36-a94fd2959427/
multiplexed sample: Homo sapiens (male) HAP-1 cell line; Homo sapiens (male) HAP-1 cell line; ... and 13 more samples
/multiplexed-samples/IGVFSM4662QKFQ/
released
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
/auxiliary-sets/IGVFDS3259WGKQ/
IGVFDS3259WGKQ
ansuman-satpathy:multiseq_igvf1_10x1
false
No limitations
/human-donors/IGVFDO0965QSBA/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO2115EOOA/
,
/human-donors/IGVFDO2722UPGC/
,
/human-donors/IGVFDO9571CSNU/
reads, seqspec
lipid-conjugated oligo sequencing
/labs/ansuman-satpathy/
/measurement-sets/IGVFDS3744SQTD/
,
/measurement-sets/IGVFDS1555ZQOW/
/institutional-certificates/16883984-b168-4b68-bc2a-37ef58354571/
,
/institutional-certificates/53fbaed7-f4c0-4932-bf77-254568743089/
,
/institutional-certificates/5e0fa625-6c72-4f32-872e-bcbc6acf630b/
,
/institutional-certificates/8ef1d59e-ef62-4890-b0ea-086d37645c75/
,
/institutional-certificates/d997512b-2c33-48e5-ae36-a94fd2959427/
multiplexed sample: Homo sapiens (male) HAP-1 cell line; Homo sapiens (male) HAP-1 cell line; ... and 13 more samples
/multiplexed-samples/IGVFSM4662QKFQ/
released
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
/analysis-sets/IGVFDS8205NXKP/
IGVFDS8205NXKP
ansuman-satpathy:igvf1_analysis_set
ansuman-satpathy:igvf1_analysis_set_10x1
false
No limitations
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO2722UPGC/
,
/human-donors/IGVFDO9571CSNU/
,
/human-donors/IGVFDO2115EOOA/
,
/human-donors/IGVFDO0965QSBA/
fragments, peaks, raw feature barcode matrix, index, cell hashing barcodes
intermediate analysis
/labs/ansuman-satpathy/
/institutional-certificates/16883984-b168-4b68-bc2a-37ef58354571/
,
/institutional-certificates/53fbaed7-f4c0-4932-bf77-254568743089/
,
/institutional-certificates/5e0fa625-6c72-4f32-872e-bcbc6acf630b/
,
/institutional-certificates/8ef1d59e-ef62-4890-b0ea-086d37645c75/
,
/institutional-certificates/d997512b-2c33-48e5-ae36-a94fd2959427/
multiplexed sample: Homo sapiens (male) HAP-1 cell line; Homo sapiens (male) HAP-1 cell line; ... and 13 more samples
/multiplexed-samples/IGVFSM4662QKFQ/
Homo sapiens multiplexed sample of HAP-1, HL-60, HUDEP-2, K562, U2OS
released
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
/measurement-sets/IGVFDS1555ZQOW/
IGVFDS1555ZQOW
ansuman-satpathy:snATAC-seq_igvf1_10x1
single-nucleus ATAC-seq
false
No limitations
/human-donors/IGVFDO0965QSBA/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO2115EOOA/
,
/human-donors/IGVFDO2722UPGC/
,
/human-donors/IGVFDO9571CSNU/
reads, seqspec
experimental data
/labs/ansuman-satpathy/
10x multiome with MULTI-seq
/institutional-certificates/16883984-b168-4b68-bc2a-37ef58354571/
,
/institutional-certificates/53fbaed7-f4c0-4932-bf77-254568743089/
,
/institutional-certificates/5e0fa625-6c72-4f32-872e-bcbc6acf630b/
,
/institutional-certificates/8ef1d59e-ef62-4890-b0ea-086d37645c75/
,
/institutional-certificates/d997512b-2c33-48e5-ae36-a94fd2959427/
multiplexed sample: Homo sapiens (male) HAP-1 cell line; Homo sapiens (male) HAP-1 cell line; ... and 13 more samples
/multiplexed-samples/IGVFSM4662QKFQ/
released
single-nucleus ATAC-seq (10x multiome with MULTI-seq)