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samples.@id
/multiplexed-samples/IGVFSM3646QLDO/
4 items
IGVFDS5111SPGA
  • ansuman-satpathy:snRNA-seq_igvf2_10x1
single-nucleus RNA sequencing assay
false
No limitations
reads, seqspec
experimental data
10x multiome with MULTI-seq
multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples
released
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
IGVFDS1583PWNS
  • ansuman-satpathy:igvf2_analysis_set
false
No limitations
fragments, peaks, index, raw feature barcode matrix, cell hashing barcodes
intermediate analysis
multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples
Homo sapiens multiplexed sample of TeloHAEC, perturbed with 10 ng/mL tumor necrosis factor alpha for 1 day, 10 ng/mL tumor necrosis factor alpha for 4 hours
released
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
IGVFDS9860EXKL
  • ansuman-satpathy:multiseq_igvf2_10x1
false
No limitations
reads, seqspec
lipid-conjugated oligo sequencing
multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples
released
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
IGVFDS6369SLCB
  • ansuman-satpathy:snATAC-seq_igvf2_10x1
single-nucleus ATAC-seq
false
No limitations
reads, seqspec
experimental data
10x multiome with MULTI-seq
multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples
released
single-nucleus ATAC-seq (10x multiome with MULTI-seq)