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samples.@id
samples.@id
/multiplexed-samples/IGVFSM3125MLLP/
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Lab
Measurement Sets
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Sample Institutional Certificates
Sample Summary
Samples
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Summary
/measurement-sets/IGVFDS9305YTYU/
IGVFDS9305YTYU
ansuman-satpathy:snATAC-seq_igvf18_10x4
single-nucleus ATAC-seq
false
No limitations
/human-donors/IGVFDO4200NZSV/
,
/human-donors/IGVFDO0384OZRW/
,
/human-donors/IGVFDO3459DFTW/
,
/human-donors/IGVFDO7503RZHO/
,
/human-donors/IGVFDO0965QSBA/
,
/human-donors/IGVFDO9018OPIO/
reads, seqspec
experimental data
/labs/ansuman-satpathy/
10x multiome with MULTI-seq
/institutional-certificates/20743336-7ae0-4e51-ab85-4ef4401b9b7d/
,
/institutional-certificates/4ff60cda-a674-443c-8864-009fa16b9f43/
multiplexed sample: Homo sapiens (female) IMR-90 cell line; Homo sapiens (female) MCF-7 cell line; ... and 17 more samples
/multiplexed-samples/IGVFSM3125MLLP/
released
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
/measurement-sets/IGVFDS4170WANT/
IGVFDS4170WANT
ansuman-satpathy:snRNA-seq_igvf18_10x4
single-nucleus RNA sequencing assay
false
No limitations
/human-donors/IGVFDO4200NZSV/
,
/human-donors/IGVFDO0384OZRW/
,
/human-donors/IGVFDO3459DFTW/
,
/human-donors/IGVFDO7503RZHO/
,
/human-donors/IGVFDO0965QSBA/
,
/human-donors/IGVFDO9018OPIO/
reads, seqspec
experimental data
/labs/ansuman-satpathy/
10x multiome with MULTI-seq
/institutional-certificates/20743336-7ae0-4e51-ab85-4ef4401b9b7d/
,
/institutional-certificates/4ff60cda-a674-443c-8864-009fa16b9f43/
multiplexed sample: Homo sapiens (female) IMR-90 cell line; Homo sapiens (female) MCF-7 cell line; ... and 17 more samples
/multiplexed-samples/IGVFSM3125MLLP/
released
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
/analysis-sets/IGVFDS7381NTBZ/
IGVFDS7381NTBZ
ansuman-satpathy:igvf18_analysis_set_10x4
false
No limitations
/human-donors/IGVFDO4200NZSV/
,
/human-donors/IGVFDO0384OZRW/
,
/human-donors/IGVFDO3459DFTW/
,
/human-donors/IGVFDO7503RZHO/
,
/human-donors/IGVFDO0965QSBA/
,
/human-donors/IGVFDO9018OPIO/
fragments, index, cell hashing barcodes, peaks, raw feature barcode matrix
intermediate analysis
/labs/ansuman-satpathy/
/institutional-certificates/20743336-7ae0-4e51-ab85-4ef4401b9b7d/
,
/institutional-certificates/4ff60cda-a674-443c-8864-009fa16b9f43/
multiplexed sample: Homo sapiens (female) IMR-90 cell line; Homo sapiens (female) MCF-7 cell line; ... and 17 more samples
/multiplexed-samples/IGVFSM3125MLLP/
Homo sapiens multiplexed sample of HCT116, HUDEP-2, IMR-90, MCF-7, SK-N-SH, TeloHAEC, perturbed with 3 μM Yoda1 for 4 hours
released
single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
/auxiliary-sets/IGVFDS6039YTCL/
IGVFDS6039YTCL
ansuman-satpathy:multiseq_igvf18_10x4
false
No limitations
/human-donors/IGVFDO7503RZHO/
,
/human-donors/IGVFDO4200NZSV/
,
/human-donors/IGVFDO0384OZRW/
,
/human-donors/IGVFDO9018OPIO/
,
/human-donors/IGVFDO3459DFTW/
,
/human-donors/IGVFDO0965QSBA/
reads, seqspec
lipid-conjugated oligo sequencing
/labs/ansuman-satpathy/
/measurement-sets/IGVFDS4170WANT/
,
/measurement-sets/IGVFDS9305YTYU/
/institutional-certificates/20743336-7ae0-4e51-ab85-4ef4401b9b7d/
,
/institutional-certificates/4ff60cda-a674-443c-8864-009fa16b9f43/
multiplexed sample: Homo sapiens (female) IMR-90 cell line; Homo sapiens (female) MCF-7 cell line; ... and 17 more samples
/multiplexed-samples/IGVFSM3125MLLP/
released
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)