Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
FileSet
Clear All
Click and hold a term momentarily to select items
without
that term.
File Set Type
Taxa
Classification
Sample
Modification
File Type
File Format
Lab
Award
Status
Externally Hosted
samples.@id
samples.@id
/multiplexed-samples/IGVFSM0539NUPM/
Download TSV
25 Items
100 Items
300 Items
4 items
ID
Accession
Aliases
Alternate Accessions
Assay
Assay
Donors
File Assembly
File Content Type
File Format
File Set Type
Lab
Measurement Sets
Preferred Assay Title
Sample Summary
Samples
Status
Summary
/measurement-sets/IGVFDS1013HCXI/
IGVFDS1013HCXI
ansuman-satpathy:snATAC-seq_igvf10_10x2
single-nucleus ATAC-seq
/human-donors/IGVFDO3459DFTW/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO1080XFGV/
,
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/ansuman-satpathy/
10x multiome with MULTI-seq
multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
/multiplexed-samples/IGVFSM0539NUPM/
released
interference single-nucleus ATAC-seq (10x multiome with MULTI-seq)
/auxiliary-sets/IGVFDS6521MNHG/
IGVFDS6521MNHG
ansuman-satpathy:multiseq_igvf10_10x2
/human-donors/IGVFDO1080XFGV/
,
/human-donors/IGVFDO7359LVPI/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO3459DFTW/
lipid-conjugated oligo sequencing
/labs/ansuman-satpathy/
/measurement-sets/IGVFDS1013HCXI/
,
/measurement-sets/IGVFDS9139TBCB/
multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
/multiplexed-samples/IGVFSM0539NUPM/
released
lipid-conjugated oligo sequencing for interference single-nucleus ATAC-seq (10x multiome with MULTI-seq), interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
/analysis-sets/IGVFDS2018URDY/
IGVFDS2018URDY
ansuman-satpathy:igvf10_analysis_set
/human-donors/IGVFDO1080XFGV/
,
/human-donors/IGVFDO7359LVPI/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO3459DFTW/
intermediate analysis
/labs/ansuman-satpathy/
multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
/multiplexed-samples/IGVFSM0539NUPM/
,
/multiplexed-samples/IGVFSM4547BFMA/
released
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
/measurement-sets/IGVFDS9139TBCB/
IGVFDS9139TBCB
ansuman-satpathy:snRNA-seq_igvf10_10x2
single-nucleus RNA sequencing assay
/human-donors/IGVFDO3459DFTW/
,
/human-donors/IGVFDO9208RPQQ/
,
/human-donors/IGVFDO1080XFGV/
,
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/ansuman-satpathy/
10x multiome with MULTI-seq
multiplexed sample: Jurkat cell line, male, Homo sapiens treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; K562 cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples
/multiplexed-samples/IGVFSM0539NUPM/
released
interference single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)