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experimental data
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gRNA sequencing
1
principal analysis
1
samples.@id
/in-vitro-systems/IGVFSM9542NUGS/
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UUID
/analysis-sets/IGVFDS9078ZWQH/
IGVFDS9078ZWQH
jay-shendure:analysis_set_CRISPRa_K562
/awards/HG011966/
/human-donors/IGVFDO9208RPQQ/
principal analysis
/measurement-sets/IGVFDS4863BMGZ/
,
/measurement-sets/IGVFDS8535CXVX/
,
/measurement-sets/IGVFDS7395DPAD/
,
/measurement-sets/IGVFDS0508ERUQ/
,
/auxiliary-sets/IGVFDS4502LQQH/
,
/auxiliary-sets/IGVFDS8929VNCP/
,
/auxiliary-sets/IGVFDS4621HUKP/
,
/auxiliary-sets/IGVFDS4834SKZS/
/labs/jay-shendure/
https://www.protocols.io/view/methods-from-multiplex-single-cell-crispra-screeni-c5zvy766
K562 cell line, modified with CRISPR modifications, transfected with a guide library
/in-vitro-systems/IGVFSM4521QSSO/
,
/in-vitro-systems/IGVFSM9542NUGS/
,
/in-vitro-systems/IGVFSM9390JSDH/
,
/in-vitro-systems/IGVFSM1594ZOQH/
released
scCRISPR activation screen: differential gene expression quantifications, sparse gene count matrix
Homo sapiens
5257dd49-492f-49b1-88fd-8b812ae8c188
/auxiliary-sets/IGVFDS4834SKZS/
IGVFDS4834SKZS
jay-shendure:CRISPRa_singlecell_K562_VPR_10Xlane2_CS1
/awards/HG011966/
/human-donors/IGVFDO9208RPQQ/
gRNA sequencing
/labs/jay-shendure/
/measurement-sets/IGVFDS0508ERUQ/
/in-vitro-systems/IGVFSM9542NUGS/
released
gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
Homo sapiens
20f51543-1cd9-43d7-95f2-f4e50179cab3
/measurement-sets/IGVFDS0508ERUQ/
IGVFDS0508ERUQ
jay-shendure:CRISPRa_singlecell_K562_VPR_10Xlane2_exprs
/assay-terms/OBI_0003660/
/awards/HG011966/
/human-donors/IGVFDO9208RPQQ/
experimental data
/labs/jay-shendure/
scCRISPR screen
https://www.protocols.io/view/methods-from-multiplex-single-cell-crispra-screeni-c5zvy766
/in-vitro-systems/IGVFSM9542NUGS/
released
scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
Homo sapiens
0ba1bffe-f4c4-4b58-bbee-170d5734d00d