IGVF

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File Set Type

cell hashing barcode sequencing
1
experimental data
1
gRNA sequencing
1
principal analysis
1

samples.@id

/in-vitro-systems/IGVFSM9532RAXS/

4 items

/auxiliary-sets/IGVFDS4359ZBDC/

IGVFDS4359ZBDC

gary-hon:CM_Pilot_2_Mini_HTO_PB_LW275

/awards/HG011996/

/human-donors/IGVFDO2718IDDQ/

cell hashing barcode sequencing

/labs/gary-hon/

/measurement-sets/IGVFDS2083PYXJ/

/in-vitro-systems/IGVFSM9532RAXS/

preview

cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

Homo sapiens

74824c95-25f7-47ae-902a-029ab982ca33

/analysis-sets/IGVFDS4762GRIW/

IGVFDS4762GRIW

gary-hon:H9_shen_construct_sgRNA_PB_PrimaryAnalysis

/awards/HG011996/

/human-donors/IGVFDO2718IDDQ/

principal analysis

/measurement-sets/IGVFDS1050IJPU/, /auxiliary-sets/IGVFDS5841QQSW/, /auxiliary-sets/IGVFDS7977FNRB/, /measurement-sets/IGVFDS0235TTEW/, /auxiliary-sets/IGVFDS5514EBWS/, /auxiliary-sets/IGVFDS5643OMJV/, /measurement-sets/IGVFDS2083PYXJ/, /auxiliary-sets/IGVFDS9721PIUS/, /auxiliary-sets/IGVFDS4359ZBDC/, /measurement-sets/IGVFDS0307GWPA/, /auxiliary-sets/IGVFDS4510VNEU/, /auxiliary-sets/IGVFDS6756DREO/

/labs/gary-hon/

https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn

H9 differentiated cell specimen induced to cardiac muscle cell, at 1 time point(s) post change, modified with CRISPR modifications, transfected with a guide library

/in-vitro-systems/IGVFSM9532RAXS/, /in-vitro-systems/IGVFSM1063UQVF/, /in-vitro-systems/IGVFSM5849QIEI/, /in-vitro-systems/IGVFSM6716LOHW/

preview

interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix

Homo sapiens

1ed723b0-b5d0-46f9-8f93-78ee61b0c227

/auxiliary-sets/IGVFDS9721PIUS/

IGVFDS9721PIUS