audit_inconsistent_sequencing_kit

Jesse Engreitz

Stanford Center for Connecting DNA Variants to Function and Phenotype

Jesse Engreitz, Stanford

TAP-seq

guide (sgRNA) library targeting accessible genome regions in 29 genomic loci

HCT116 cell line, male, Homo sapiens treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with AID system targeting RAD21, CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci

gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci

Accession

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Alternate Accessions

Assay Term

Assemblies

Assessed Genes

Associated Phenotypes

Award

Description

Donors

Taxa

File Set Type

Functional Assay Mechanisms

Input File Sets

Measurement Sets

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Prediction Objects

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Protocols

Sample Summary

Samples

Prediction Scope

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Genes

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Summary

Assay Targeted Genes

Transcriptome Annotations

UUID

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Sample

Files

Provenance

Quality

Object Type

Classification

Modification

Treatment

File Type

File Format

Audit Category: Internal Action

Externally Hosted

samples.@id

Report