IGVF

cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

Homo sapiens

cc055442-206f-444e-97f6-673367a29671

/analysis-sets/IGVFDS5498SDRJ/

IGVFDS5498SDRJ

gary-hon:WTC11_CM_Pilot2_Mini_LPv4_PrimaryAnalysis

/awards/HG011996/

/human-donors/IGVFDO1756PPKO/

principal analysis

/measurement-sets/IGVFDS6863PGGX/, /auxiliary-sets/IGVFDS0465GFSG/, /auxiliary-sets/IGVFDS5699EGGK/, /measurement-sets/IGVFDS4629NPBV/, /auxiliary-sets/IGVFDS2536BETY/, /auxiliary-sets/IGVFDS3364ARLO/, /measurement-sets/IGVFDS3695BOGD/, /auxiliary-sets/IGVFDS4935NKQB/, /auxiliary-sets/IGVFDS4210TUPX/, /measurement-sets/IGVFDS2827ZGPM/, /auxiliary-sets/IGVFDS0373CFJS/, /auxiliary-sets/IGVFDS3215JVHK/

/labs/gary-hon/

https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell, at 1 time point(s) post change, modified with CRISPR modifications, transfected with a guide library

/in-vitro-systems/IGVFSM7766HOYF/, /in-vitro-systems/IGVFSM0565MLZG/, /in-vitro-systems/IGVFSM2127MVQH/, /in-vitro-systems/IGVFSM9285BBSI/, /in-vitro-systems/IGVFSM2176YXFG/

preview

interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression

Homo sapiens

b66e7cc5-5410-4e77-9437-f9df054bc0c0

/auxiliary-sets/IGVFDS4935NKQB/

IGVFDS4935NKQB

gary-hon:differentited_WTC11_CM_Pilot2_Mini_LPv4_sgRNA_LW429

/awards/HG011996/

/human-donors/IGVFDO1756PPKO/

gRNA sequencing

/labs/gary-hon/

/measurement-sets/IGVFDS3695BOGD/

/in-vitro-systems/IGVFSM7766HOYF/

preview

gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

Homo sapiens

1b009bbc-c4db-47dd-ba78-ab3ecf7f5372