IGVF

Click and hold a term momentarily to select items without that term.

File Set Type

cell hashing barcode sequencing
1
experimental data
1
gRNA sequencing
1
principal analysis
1

samples.@id

/in-vitro-systems/IGVFSM7215JDPM/

4 items

/analysis-sets/IGVFDS4003HZAB/

IGVFDS4003HZAB

gary-hon:CM_Pilot_2_Lenti_RNA

/awards/HG011996/

/human-donors/IGVFDO1756PPKO/

principal analysis

/labs/gary-hon/

https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell, at 1 time point(s) post change, modified with CRISPR modifications, transfected with a guide library

/in-vitro-systems/IGVFSM0248SELV/, /in-vitro-systems/IGVFSM7215JDPM/, /in-vitro-systems/IGVFSM4930FDUF/, /in-vitro-systems/IGVFSM5628VVVG/, /in-vitro-systems/IGVFSM2215YBLM/, /in-vitro-systems/IGVFSM0981UTUA/, /in-vitro-systems/IGVFSM1972EKCJ/, /in-vitro-systems/IGVFSM0333RWYR/

preview

interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression

Homo sapiens

d8e1c827-68b5-4899-9be1-2012403dbd86

/auxiliary-sets/IGVFDS3633OXMI/

IGVFDS3633OXMI

gary-hon:CM_Pilot_2_Lenti_HTO_LW265

/awards/HG011996/

/human-donors/IGVFDO1756PPKO/

cell hashing barcode sequencing

/labs/gary-hon/

/measurement-sets/IGVFDS5033OBAO/

/in-vitro-systems/IGVFSM7215JDPM/

preview

cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

Homo sapiens

c9503d76-3826-4b3a-a09b-77214da7661e

/auxiliary-sets/IGVFDS7126MOZN/

IGVFDS7126MOZN