IGVF

/auxiliary-sets/IGVFDS8622RRUW/

4 items

IGVFDS8622RRUW

jay-shendure:dev_CRE_mEBs_mBC_repA_10Xlane2_reads

quantification DNA barcode sequencing

/measurement-sets/IGVFDS6677JVOR/

/analysis-sets/IGVFDS2774OLAH/

released

quantification DNA barcode sequencing for MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci

Mus musculus

993540da-2e4f-4b4a-9bf7-364168c0918d

IGVFDS2774OLAH

jay-shendure:analysis_set_scQers_mEBs

/curated-sets/IGVFDS0238EDXB/, /measurement-sets/IGVFDS5248DHZT/, /measurement-sets/IGVFDS6677JVOR/, /measurement-sets/IGVFDS0228POXF/, /measurement-sets/IGVFDS7984TCLH/, /measurement-sets/IGVFDS6967XELN/, /measurement-sets/IGVFDS1598IBNK/, /auxiliary-sets/IGVFDS5801KSAS/, /auxiliary-sets/IGVFDS8622RRUW/, /auxiliary-sets/IGVFDS7168JGPF/, /auxiliary-sets/IGVFDS1166KGZN/, /auxiliary-sets/IGVFDS1135XOEU/, /auxiliary-sets/IGVFDS7645MEIE/, /auxiliary-sets/IGVFDS7792HFAY/, /auxiliary-sets/IGVFDS7067SBQL/, /auxiliary-sets/IGVFDS1156NHWQ/, /auxiliary-sets/IGVFDS8758JSUK/, /auxiliary-sets/IGVFDS6059ISIJ/, /auxiliary-sets/IGVFDS7244MIKM/

principal analysis

https://www.protocols.io/file/n92rb7r27.pdf

/in-vitro-systems/IGVFSM4494VUEQ/, /in-vitro-systems/IGVFSM6984COJC/, /in-vitro-systems/IGVFSM8913GAXO/, /in-vitro-systems/IGVFSM4704LAYE/, /in-vitro-systems/IGVFSM0317RLIP/, /in-vitro-systems/IGVFSM1855DKEJ/

released

principal analysis of MPRA (scQer) data

Mus musculus

85b28f63-a08e-495e-b610-5a2068e600a6

/measurement-sets/IGVFDS6677JVOR/

IGVFDS6677JVOR

jay-shendure:dev_CRE_mEBs_GEx_repA_10Xlane2_reads

/assay-terms/OBI_0002675/

experimental data

https://www.protocols.io/file/n92rb7r27.pdf

MPRA (scQer)

/auxiliary-sets/IGVFDS7067SBQL/

released

MPRA (scQer) integrating a reporter library targeting accessible genome regions in many genomic loci

Mus musculus

7d680197-7d19-48d1-aec1-bee6af970690

IGVFDS7067SBQL

jay-shendure:dev_CRE_mEBs_oBC_repA_10Xlane2_reads

circularized RNA barcode detection

/measurement-sets/IGVFDS6677JVOR/