IGVF

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File Set Type

experimental data
1
intermediate analysis
1
principal analysis
1

samples.@id

/in-vitro-systems/IGVFSM5361EAGX/

3 items

/measurement-sets/IGVFDS8881TVYW/

IGVFDS8881TVYW

charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep3

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO3212TBUN/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-for-human-ipsc-cm-following-gsk3-inhibiti-5qpvokj27l4o

/in-vitro-systems/IGVFSM5361EAGX/

released

ATAC-seq

Homo sapiens

711fc963-6f65-45ab-ab9d-8fc6a9dea696

/analysis-sets/IGVFDS9490WNXZ/

IGVFDS9490WNXZ

charles-gersbach:analysis-set-bulk-atac-DEanalysis

/awards/HG012053/

/human-donors/IGVFDO3212TBUN/

principal analysis

/analysis-sets/IGVFDS4606DSTJ/

/labs/charles-gersbach/

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell, at 1 time point(s) post change, antagonized with treatment(s)

/in-vitro-systems/IGVFSM6698FQIG/, /in-vitro-systems/IGVFSM9739CNEQ/, /in-vitro-systems/IGVFSM5361EAGX/, /in-vitro-systems/IGVFSM7187NNQU/, /in-vitro-systems/IGVFSM4983MYZQ/, /in-vitro-systems/IGVFSM9172PRNN/

released

ATAC-seq: fold change over control, peak quantifications

Homo sapiens

5567d409-55b3-4f42-a791-f3bde6377e51

/analysis-sets/IGVFDS4606DSTJ/

IGVFDS4606DSTJ

charles-gersbach:analysis-set-bulk-atac-count

/awards/HG012053/

/human-donors/IGVFDO3212TBUN/

intermediate analysis

/measurement-sets/IGVFDS5576TGNS/, /measurement-sets/IGVFDS9961QTUB/, /measurement-sets/IGVFDS8881TVYW/, /measurement-sets/IGVFDS3147NUPL/, /measurement-sets/IGVFDS7875RFFR/, /measurement-sets/IGVFDS7128QRSY/

/labs/charles-gersbach/

https://www.protocols.io/view/atac-seq-for-human-ipsc-cm-following-gsk3-inhibiti-5qpvokj27l4o

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell, at 1 time point(s) post change, antagonized with treatment(s)

/in-vitro-systems/IGVFSM6698FQIG/, /in-vitro-systems/IGVFSM9739CNEQ/, /in-vitro-systems/IGVFSM4983MYZQ/, /in-vitro-systems/IGVFSM5361EAGX/, /in-vitro-systems/IGVFSM7187NNQU/, /in-vitro-systems/IGVFSM9172PRNN/

released

ATAC-seq: alignments

Homo sapiens

224d5c53-a2de-4b47-bc55-d112075a995b