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cell hashing barcode sequencing
1
experimental data
1
gRNA sequencing
1
principal analysis
1
samples.@id
/in-vitro-systems/IGVFSM2726ORRN/
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Functional Assay Mechanisms
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UUID
/auxiliary-sets/IGVFDS1128FXRR/
IGVFDS1128FXRR
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_sgRNA_LW286
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
gRNA sequencing
/labs/gary-hon/
/measurement-sets/IGVFDS5429CXNB/
/in-vitro-systems/IGVFSM2726ORRN/
preview
gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
c11b3cdb-416d-4dbd-8670-a52e872c3e5b
/auxiliary-sets/IGVFDS3465KEWH/
IGVFDS3465KEWH
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_HTO_LW286
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
cell hashing barcode sequencing
/labs/gary-hon/
/measurement-sets/IGVFDS5429CXNB/
/in-vitro-systems/IGVFSM2726ORRN/
preview
cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
ba93f970-aa8e-4e39-9d38-89526d6e31b2
/measurement-sets/IGVFDS5429CXNB/
IGVFDS5429CXNB
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_LW286
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM2726ORRN/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
acb59998-eb3d-4a8e-9afa-9a8a110c1a9d
/analysis-sets/IGVFDS7340YDHF/
IGVFDS7340YDHF
gary-hon:WTC11_TF_Perturb_Seq_Pilot_iPSC_Lenti_PrimaryAnalysis
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
principal analysis
/measurement-sets/IGVFDS5429CXNB/
,
/auxiliary-sets/IGVFDS1128FXRR/
,
/auxiliary-sets/IGVFDS3465KEWH/
,
/measurement-sets/IGVFDS2692VBHQ/
,
/auxiliary-sets/IGVFDS1937JPZI/
,
/auxiliary-sets/IGVFDS2373RGIJ/
,
/measurement-sets/IGVFDS3975OFAO/
,
/auxiliary-sets/IGVFDS6503WNZT/
,
/auxiliary-sets/IGVFDS9718OGWQ/
,
/measurement-sets/IGVFDS3495FUIW/
,
/auxiliary-sets/IGVFDS1931QVXR/
,
/auxiliary-sets/IGVFDS6015JDKU/
/labs/gary-hon/
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
GM25256 (WTC-11) cell line, modified with CRISPR modifications, transfected with a guide library
/in-vitro-systems/IGVFSM1597KVRS/
,
/in-vitro-systems/IGVFSM2726ORRN/
,
/in-vitro-systems/IGVFSM1153INDY/
,
/in-vitro-systems/IGVFSM9411HZLU/
preview
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression
Homo sapiens
ab709a68-2d95-46ba-9462-decc91623d62