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2 items
IGVFDS0103FMQG
  • bill-majoros:bluestarr-k562-model-v0.1.1
BlueSTARR v0.1.1 is the updated version that was trained on a full-set dataset containing sequences from all chromosomes, unlike the original model (v0.1.0), which excluded chromosomes 1 and 2 for testing and validation. It uses DNA and RNA counts normalized by library size, employs unbiased down-sampling for training, and optimizes predictions using Mean Squared Error (MSE) as the loss function
neural network
BlueSTARR-K562
regulatory elements
released
BlueSTARR-K562 v0.1.1 neural network predicting regulatory elements
23c86e3d-f14f-4068-a0c1-8e6291911a01
IGVFDS4146YLZU
  • igvf:cCREs
GRCh38
cCREs
elements
released
Homo sapiens GRCh38 elements
Homo sapiens
057ff349-a0f1-4e56-84b0-a9fd550cadca