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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
8
Preferred Assay Title
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Perturb-seq
8
Auxiliary Data
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None
cell hashing barcode sequencing
8
gRNA sequencing
8
Construct Library Data
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guide library
8
Sequencing Platform
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Illumina NovaSeq 6000
8
input_for
/analysis-sets/IGVFDS9192YMGI/
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8 items
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Taxa
UUID
/measurement-sets/IGVFDS2593KURF/
IGVFDS2593KURF
gary-hon:CM_Pilot_2_PB_RNA_LW237
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM2329UXLZ/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
c26b6951-d9c1-4585-8831-d3168a1427c2
/measurement-sets/IGVFDS9005AVSB/
IGVFDS9005AVSB
gary-hon:CM_Pilot_2_PB_RNA_LW232
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM4953FLXN/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
c06a9035-41a3-4278-9921-4a68ed4ad402
/measurement-sets/IGVFDS8705MRYI/
IGVFDS8705MRYI
gary-hon:CM_Pilot_2_PB_RNA_LW234
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM8137TZJW/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
5723e9aa-6033-4b68-b7e8-e8c5aaacbc2c
/measurement-sets/IGVFDS1334EIHS/
IGVFDS1334EIHS
gary-hon:CM_Pilot_2_PB_RNA_LW231
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM7740VKXC/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
498f2f67-cbce-447d-a51a-60bd5a21fc9e
/measurement-sets/IGVFDS0890CUXC/
IGVFDS0890CUXC
gary-hon:CM_Pilot_2_PB_RNA_LW236
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM5652SBGF/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
495264c8-2fa3-4ec3-969a-a0415401171e
/measurement-sets/IGVFDS8701ERXN/
IGVFDS8701ERXN
gary-hon:CM_Pilot_2_PB_RNA_LW238
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM9326DRHX/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
317a2967-f86a-4a61-834e-4143f4d619d2
/measurement-sets/IGVFDS4323LXLZ/
IGVFDS4323LXLZ
gary-hon:CM_Pilot_2_PB_RNA_LW233
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM9371INZC/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
089942f3-ca9a-4679-b560-468c562de2af
/measurement-sets/IGVFDS1663ZHVE/
IGVFDS1663ZHVE
gary-hon:CM_Pilot_2_PB_RNA_LW235
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM2930BIPX/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
00b2dc30-5dd2-43d3-8051-4133a9c52ced