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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
20
Preferred Assay Title
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Perturb-seq
20
Auxiliary Data
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None
gRNA sequencing
20
Construct Library Data
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guide library
20
Sequencing Platform
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Illumina NovaSeq 6000
20
input_for
/analysis-sets/IGVFDS7943IIWZ/
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UUID
/measurement-sets/IGVFDS0909ARVL/
IGVFDS0909ARVL
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_7
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM9362CZWG/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
f26bab24-9488-47bf-931f-8c8ed7876447
/measurement-sets/IGVFDS0385ESBQ/
IGVFDS0385ESBQ
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_6
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM9019CRXH/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
ed99fd09-9ae3-48b3-8eeb-84908cf5f1e1
/measurement-sets/IGVFDS8841TWDX/
IGVFDS8841TWDX
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_5
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM6643KIQQ/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
e64f51eb-1522-4118-ad43-c0d10d3070a9
/measurement-sets/IGVFDS2630GWQK/
IGVFDS2630GWQK
jesse-engreitz:measurement_set-scRNAseq_2kG_11AMDox_6
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM3814HZQI/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
e611ae5c-0e45-4465-8e2b-f877be450eb5
/measurement-sets/IGVFDS4291ANNC/
IGVFDS4291ANNC
jesse-engreitz:measurement_set-scRNAseq_2kG_11AMDox_5
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM2486RPXY/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
c9711128-6a58-4e36-a735-cdbad8c9047e
/measurement-sets/IGVFDS9527RJVT/
IGVFDS9527RJVT
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_7
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM7408HYIB/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
c5dc9e7a-cf42-4b30-a40d-9bfcbe751cdb
/measurement-sets/IGVFDS9186LBQJ/
IGVFDS9186LBQJ
jesse-engreitz:measurement_set-scRNAseq_2kG_11AMDox_4
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM6969BXDT/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
bfedafb9-c1b5-4b86-a954-2823ac8c0522
/measurement-sets/IGVFDS7726TKVM/
IGVFDS7726TKVM
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_6
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM9689NFEU/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
a8b437a1-4cee-4253-85dc-2589aeccdce7
/measurement-sets/IGVFDS0562EWQF/
IGVFDS0562EWQF
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_4
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM3700IHHL/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
934d2c7c-d4fd-4bd0-90e7-9fe7a0b42b90
/measurement-sets/IGVFDS5673IZFI/
IGVFDS5673IZFI
jesse-engreitz:measurement_set-scRNAseq_2kG_11AMDox_1
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM6272EHGA/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
77fa3200-3c41-4986-9db0-aef6fb407b70
/measurement-sets/IGVFDS7729SUIF/
IGVFDS7729SUIF
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_4
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM7987ARAX/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
64aecf29-c156-41e1-8cc6-46e1c0f852c5
/measurement-sets/IGVFDS7020OWZV/
IGVFDS7020OWZV
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_2
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM4878HUHM/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
57c54bd3-0442-454e-b4ec-fd144c15c839
/measurement-sets/IGVFDS7600PZYR/
IGVFDS7600PZYR
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_1
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM0862BZMH/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
506f4995-5647-411b-8af6-6f196bd52da8
/measurement-sets/IGVFDS1330GUQX/
IGVFDS1330GUQX
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_3
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM9151FQCE/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
478b1a64-b096-4085-9489-9f6cfb6d98d5
/measurement-sets/IGVFDS7065TFMP/
IGVFDS7065TFMP
jesse-engreitz:measurement_set-scRNAseq_2kG_11AMDox_3
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM6249JKCM/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
384cd9d8-0259-4930-8a4f-687a4fef0509
/measurement-sets/IGVFDS7665VXNR/
IGVFDS7665VXNR
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_1
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM2673TSAF/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
23bd9d54-4c7a-4b74-ad7d-6abb4d1227b6
/measurement-sets/IGVFDS0237AFZT/
IGVFDS0237AFZT
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox1_5
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM1061NWCP/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
1eeb26d9-a34f-44b6-a93e-f59265f6e830
/measurement-sets/IGVFDS6988JXXY/
IGVFDS6988JXXY
jesse-engreitz:measurement_set-scRNAseq_2kG_11AMDox_2
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM1575CPXR/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
175a8ad8-28a7-4aff-b98d-c8f6df27ff82
/measurement-sets/IGVFDS9990NLDH/
IGVFDS9990NLDH
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_2
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM3104QEEP/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
11bc0bd1-70c1-4996-a9d5-3db831bbcc89
/measurement-sets/IGVFDS4759EOBT/
IGVFDS4759EOBT
jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_3
/assay-terms/OBI_0003660/
/awards/HG011972/
/human-donors/IGVFDO3459DFTW/
experimental data
/labs/jesse-engreitz/
Perturb-seq
https://www.protocols.io/view/systematic-perturb-seq-to-discover-endothelial-cel-261ged73yv47/v1
/in-vitro-systems/IGVFSM0914ERRM/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Homo sapiens
02152e7d-9e41-45ba-bac5-5453ff4e5dc3