IGVF

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Assay

bulk assay for transposase-accessible chromatin using sequencing
3

Preferred Assay Title

ATAC-seq
3

Construct Library Data

expression vector library
3

Sequencing Platform

Illumina NextSeq 2000
3

input_for

/analysis-sets/IGVFDS7714RCSY/

3 items

/measurement-sets/IGVFDS5049UPEO/

IGVFDS5049UPEO

charles-gersbach:cd8-tcells-atac-seq-acute-activation-gfp-rep3

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO8289ZMDD/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-primary-human-t-cells-overexpressing-batf-c5pfy5jn

/primary-cells/IGVFSM8800PZZL/

released

ATAC-seq integrating a control transduction expression vector library

Homo sapiens

db0ca36b-2ad7-404a-92c0-6d6451b45dd1

/measurement-sets/IGVFDS7967GRIT/

IGVFDS7967GRIT

charles-gersbach:cd8-tcells-atac-seq-acute-activation-gfp-rep1

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO9588OERW/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-primary-human-t-cells-overexpressing-batf-c5pfy5jn

/primary-cells/IGVFSM3998OQDA/

released

ATAC-seq integrating a control transduction expression vector library

Homo sapiens

48d87a85-315a-4857-b070-2b15e9e6b11c

/measurement-sets/IGVFDS5416ROJO/

IGVFDS5416ROJO

charles-gersbach:cd8-tcells-atac-seq-acute-activation-gfp-rep2

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO1522NSLA/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-primary-human-t-cells-overexpressing-batf-c5pfy5jn

/primary-cells/IGVFSM6851CRLW/

released

ATAC-seq integrating a control transduction expression vector library

Homo sapiens

28b33912-cf32-4d56-bf40-29e5743786ac