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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
4
Preferred Assay Title
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None
Perturb-seq
4
Auxiliary Data
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None
cell hashing barcode sequencing
4
gRNA sequencing
4
Construct Library Data
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guide library
4
Sequencing Platform
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Illumina NextSeq 2000
4
input_for
/analysis-sets/IGVFDS7340YDHF/
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/measurement-sets/IGVFDS2692VBHQ/
IGVFDS2692VBHQ
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_LW287
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM1153INDY/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
b7e426f1-2366-4598-8009-1993c34e1c20
/measurement-sets/IGVFDS5429CXNB/
IGVFDS5429CXNB
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_LW286
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM2726ORRN/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
acb59998-eb3d-4a8e-9afa-9a8a110c1a9d
/measurement-sets/IGVFDS3495FUIW/
IGVFDS3495FUIW
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_LW289
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM1597KVRS/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
85804c71-b383-4b0a-8064-604b831d29af
/measurement-sets/IGVFDS3975OFAO/
IGVFDS3975OFAO
gary-hon:TF_Perturb_Seq_Pilot_Lenti_iPSC_LW288
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM9411HZLU/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
06d6a5ac-054c-446f-b13e-073830775300