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Assay
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in vitro CRISPR screen using flow cytometry
41
Preferred Assay Title
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Variant-EFFECTS
41
Construct Library Data
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guide library
40
Readout Genes
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PPIF
41
Sequencing Platform
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Illumina NovaSeq X
41
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/analysis-sets/IGVFDS4833ZRTZ/
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Taxa
UUID
/measurement-sets/IGVFDS5752WCRU/
IGVFDS5752WCRU
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep4-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM0996JAYD/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
eeef85bf-df17-45c7-b823-b8f358819ac1
/measurement-sets/IGVFDS5956AIUB/
IGVFDS5956AIUB
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep1-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM2431ESHZ/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e8cd26b6-3747-41b7-beb3-65497070d0fd
/measurement-sets/IGVFDS8947TZOV/
IGVFDS8947TZOV
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep3-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5476WOWE/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e6d41c4a-7ea9-4b32-bc8e-812a454bb480
/measurement-sets/IGVFDS0241SXOC/
IGVFDS0241SXOC
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep2-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM1217MGZZ/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e65ef96c-6bf3-4b0c-8cf6-507cdaffed80
/measurement-sets/IGVFDS6385NQQG/
IGVFDS6385NQQG
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep1-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4797INCW/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e3bb46e5-1f00-4998-82b6-d3bcce970abb
/measurement-sets/IGVFDS7723OVPC/
IGVFDS7723OVPC
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep4-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9601DQGW/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e38fe8f1-a020-44d0-8cfa-5340b8eb5bbf
/measurement-sets/IGVFDS5968XLTS/
IGVFDS5968XLTS
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep1-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9328WXCJ/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e21237d0-88bb-45ce-b034-5a65eed83f32
/measurement-sets/IGVFDS1171XPUF/
IGVFDS1171XPUF
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep4-FACS_Input_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM2428YSLH/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
d7238f0b-3f70-43db-9da6-a723038a5af6
/measurement-sets/IGVFDS0264KDQT/
IGVFDS0264KDQT
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep1-FACS_Input_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM2936AUBH/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
cb492e66-1159-4f79-bb31-b2f9836c3a6e
/measurement-sets/IGVFDS9309HKUH/
IGVFDS9309HKUH
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-FACS_Input_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5578CHGC/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
be0b7cde-1d56-495f-84e5-ce74d88a7849
/measurement-sets/IGVFDS6090MUID/
IGVFDS6090MUID
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep4-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9224JLWC/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
b5392576-31b4-478b-9cad-317b2dd31c13
/measurement-sets/IGVFDS2992ZYJE/
IGVFDS2992ZYJE
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep3-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM3785MWIW/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
ada81a01-804f-40ad-8de7-bd7285fc16ab
/measurement-sets/IGVFDS5468AKZL/
IGVFDS5468AKZL
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep4-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM2569GZNY/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
a9264d7e-758e-49e6-afe5-6d12a18a6bb9
/measurement-sets/IGVFDS7974EEXF/
IGVFDS7974EEXF
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep1-FACS_Input_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM6465EIGT/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
a777aeec-78f2-44cf-8b06-fb45852ca261
/measurement-sets/IGVFDS7802HNSL/
IGVFDS7802HNSL
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep4-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5798HMLY/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
9cf0a997-0282-4b5f-bf33-a29f44ef615f
/measurement-sets/IGVFDS6768LDRK/
IGVFDS6768LDRK
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep3-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5228SJVO/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
9653f754-dd7c-4d86-bf5d-f37fbe46a09a
/measurement-sets/IGVFDS4103BJLT/
IGVFDS4103BJLT
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-THP1-PE2_Exp4_NegControl_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM6087TFXW/
preview
prime editing Variant-EFFECTS
Homo sapiens
93c0cf73-9901-40ad-bc7b-70e00f79fd87
/measurement-sets/IGVFDS9746QVGD/
IGVFDS9746QVGD
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep1-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM0481TGPS/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
8fdb6d75-e22f-47a4-b42e-1a60d36517bc
/measurement-sets/IGVFDS1396XIPC/
IGVFDS1396XIPC
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep3-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4077CGNC/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
86e7a45e-13f0-4cba-b924-949c1865d053
/measurement-sets/IGVFDS1090HOMT/
IGVFDS1090HOMT
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep4-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM8288BMOI/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
85586979-ad30-463c-9e16-6a322d7cf1c7
/measurement-sets/IGVFDS7922GOJN/
IGVFDS7922GOJN
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep1-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5650CCAJ/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
847fe7a1-f3bb-48e8-b390-b36cc71d7b0a
/measurement-sets/IGVFDS7527SHUS/
IGVFDS7527SHUS
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4399YQDM/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
74107772-d5ae-4341-8c5c-d720618fff4f
/measurement-sets/IGVFDS9127RZLI/
IGVFDS9127RZLI
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep1-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM7129MJSD/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
6f24623c-fd4c-450c-b958-0d0172d678b1
/measurement-sets/IGVFDS8140CVHC/
IGVFDS8140CVHC
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep2-FFrep2-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9180KDGZ/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
6c7e99d3-3130-47c4-bac2-785e4183fbd1
/measurement-sets/IGVFDS5295ONUY/
IGVFDS5295ONUY
jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM0101DTPD/
preview
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
6994eb82-730c-4633-acf0-203a442edbd9