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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
4
Preferred Assay Title
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Perturb-seq
4
Auxiliary Data
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None
cell hashing barcode sequencing
4
gRNA sequencing
4
Construct Library Data
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guide library
4
Sequencing Platform
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Illumina NextSeq 2000
4
input_for
/analysis-sets/IGVFDS4762GRIW/
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/measurement-sets/IGVFDS1050IJPU/
IGVFDS1050IJPU
gary-hon:CM_Pilot_2_Mini_PB_LW273
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM1063UQVF/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
d65018f9-7426-48b4-9ad6-586eba425ea1
/measurement-sets/IGVFDS0235TTEW/
IGVFDS0235TTEW
gary-hon:CM_Pilot_2_Mini_PB_LW274
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM5849QIEI/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
0b4d36d5-8fb8-4562-85b2-68f7a6715f2e
/measurement-sets/IGVFDS0307GWPA/
IGVFDS0307GWPA
gary-hon:CM_Pilot_2_Mini_PB_LW276
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM6716LOHW/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
0474d200-7886-47b2-b3e2-a191e86d684b
/measurement-sets/IGVFDS2083PYXJ/
IGVFDS2083PYXJ
gary-hon:CM_Pilot_2_Mini_PB_LW275
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM9532RAXS/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
03a5a83d-cf60-41f9-af26-ab2c63a466fa