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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
4
Preferred Assay Title
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scCRISPR screen
4
Auxiliary Data
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None
gRNA sequencing
4
Construct Library Data
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guide library
4
Sequencing Platform
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Illumina NextSeq 2000
4
input_for
/analysis-sets/IGVFDS4021XJLW/
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/measurement-sets/IGVFDS2385QENN/
IGVFDS2385QENN
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane3_exprs
/assay-terms/OBI_0003660/
/awards/HG011966/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/jay-shendure/
scCRISPR screen
https://www.protocols.io/view/methods-from-multiplex-single-cell-crispra-screeni-c5zvy766
/in-vitro-systems/IGVFSM8317ZTFV/
released
scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
Homo sapiens
ee12fd85-d813-46d6-a37c-c21a420bcc0a
/measurement-sets/IGVFDS0272VVTX/
IGVFDS0272VVTX
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane2_exprs
/assay-terms/OBI_0003660/
/awards/HG011966/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/jay-shendure/
scCRISPR screen
https://www.protocols.io/view/methods-from-multiplex-single-cell-crispra-screeni-c5zvy766
/in-vitro-systems/IGVFSM9913PXTT/
released
scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
Homo sapiens
e44c57f5-8f0c-40dd-966d-944b1812fbbb
/measurement-sets/IGVFDS2133JAFB/
IGVFDS2133JAFB
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane4_exprs
/assay-terms/OBI_0003660/
/awards/HG011966/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/jay-shendure/
scCRISPR screen
https://www.protocols.io/view/methods-from-multiplex-single-cell-crispra-screeni-c5zvy766
/in-vitro-systems/IGVFSM8382KOXO/
released
scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
Homo sapiens
7ef1a019-1ec3-47a4-be6e-829b5076481d
/measurement-sets/IGVFDS9384BVGM/
IGVFDS9384BVGM
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane1_exprs
/assay-terms/OBI_0003660/
/awards/HG011966/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/jay-shendure/
scCRISPR screen
https://www.protocols.io/view/methods-from-multiplex-single-cell-crispra-screeni-c5zvy766
/in-vitro-systems/IGVFSM7750SNNY/
released
scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci
Homo sapiens
6eece0f5-d172-4615-ac08-40151c695c52