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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
8
Preferred Assay Title
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Perturb-seq
8
Auxiliary Data
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None
cell hashing barcode sequencing
8
gRNA sequencing
8
Construct Library Data
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guide library
8
Sequencing Platform
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Illumina NextSeq 2000
8
input_for
/analysis-sets/IGVFDS4003HZAB/
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UUID
/measurement-sets/IGVFDS6054GEKL/
IGVFDS6054GEKL
gary-hon:CM_Pilot_2_Lenti_RNA_LW264
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM0981UTUA/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
de5e46b9-d343-40f4-8725-6facd3ccabb5
/measurement-sets/IGVFDS4088YJYC/
IGVFDS4088YJYC
gary-hon:CM_Pilot_2_Lenti_RNA_LW267
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM5628VVVG/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
a860413b-261a-4705-a9e6-6ee8309c80aa
/measurement-sets/IGVFDS5033OBAO/
IGVFDS5033OBAO
gary-hon:CM_Pilot_2_Lenti_RNA_LW265
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM7215JDPM/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
7d999a47-35a2-4cff-8866-99dc93d29a8c
/measurement-sets/IGVFDS9572XHUR/
IGVFDS9572XHUR
gary-hon:CM_Pilot_2_Lenti_RNA_LW262
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM0248SELV/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
71a0ce20-b336-46e8-9615-dd72d36c57fd
/measurement-sets/IGVFDS5173WYKU/
IGVFDS5173WYKU
gary-hon:CM_Pilot_2_Lenti_RNA_LW268
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM2215YBLM/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
68b15f9e-837b-4c83-8907-eb0f0e6068f3
/measurement-sets/IGVFDS5931MYJN/
IGVFDS5931MYJN
gary-hon:CM_Pilot_2_Lenti_RNA_LW266
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM4930FDUF/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
5da69cc0-f9db-46a7-a096-2ca8601c9401
/measurement-sets/IGVFDS4965SLDK/
IGVFDS4965SLDK
gary-hon:CM_Pilot_2_Lenti_RNA_LW263
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM0333RWYR/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
16d2bf43-4efb-434f-8f46-24e2fd65e76d
/measurement-sets/IGVFDS0262BREE/
IGVFDS0262BREE
gary-hon:CM_Pilot_2_Lenti_RNA_LW261
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO1756PPKO/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM1972EKCJ/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
05642a32-4377-4b02-9bc8-5ac17067a4bd