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MeasurementSet
Measurement Set Details
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
3
Preferred Assay Title
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Perturb-seq
3
Auxiliary Data
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None
gRNA sequencing
3
Construct Library Data
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guide library
3
Investigated Gene
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BACH2
3
BATF
3
BATF3
3
BHLHE40
3
CREM
3
DNMT1
3
EOMES
3
FLI1
3
FOXD2
3
FOXO1
3
See all 24 terms
Sequencing Platform
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Illumina NovaSeq 6000
3
input_for
/analysis-sets/IGVFDS3319RFFN/
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Protocols
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Taxa
UUID
/measurement-sets/IGVFDS9674AATW/
IGVFDS9674AATW
charles-gersbach:cd8-tcells-perturb-seq-crispri-gex-rep3
/assay-terms/OBI_0003660/
/awards/HG012053/
/human-donors/IGVFDO4425KRAT/
experimental data
/labs/charles-gersbach/
Perturb-seq
https://www.protocols.io/view/perturb-seq-characterizing-regulators-of-t-cell-fu-c5s9y6h6
,
https://www.protocols.io/view/crispri-tiling-screens-c5rby52n
/primary-cells/IGVFSM5189UBOI/
released
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes
Homo sapiens
7834c361-d558-42d5-98a1-91b2219b3c30
/measurement-sets/IGVFDS9813VHFD/
IGVFDS9813VHFD
charles-gersbach:cd8-tcells-perturb-seq-crispri-gex-rep1
/assay-terms/OBI_0003660/
/awards/HG012053/
/human-donors/IGVFDO7605NZFO/
experimental data
/labs/charles-gersbach/
Perturb-seq
https://www.protocols.io/view/perturb-seq-characterizing-regulators-of-t-cell-fu-c5s9y6h6
,
https://www.protocols.io/view/crispri-tiling-screens-c5rby52n
/primary-cells/IGVFSM3795JDHP/
released
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes
Homo sapiens
3d7040d7-c833-412d-af01-35875b358070
/measurement-sets/IGVFDS1333MBPK/
IGVFDS1333MBPK
charles-gersbach:cd8-tcells-perturb-seq-crispri-gex-rep2
/assay-terms/OBI_0003660/
/awards/HG012053/
/human-donors/IGVFDO6082RNLT/
experimental data
/labs/charles-gersbach/
Perturb-seq
https://www.protocols.io/view/perturb-seq-characterizing-regulators-of-t-cell-fu-c5s9y6h6
,
https://www.protocols.io/view/crispri-tiling-screens-c5rby52n
/primary-cells/IGVFSM2747RJFY/
released
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in 24 genes
Homo sapiens
040e6129-fefb-467d-a0fe-75075e3c335e