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MeasurementSet
Measurement Set Details
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Assay
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massively parallel reporter assay
38
Preferred Assay Title
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None
MPRA
38
Auxiliary Data
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None
quantification DNA barcode sequencing
38
Construct Library Data
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None
reporter library
38
Sequencing Platform
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None
Illumina NextSeq 500
24
Illumina NextSeq 2000
16
input_for
/analysis-sets/IGVFDS2622CKLA/
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Preferred Assay Title
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Samples
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Taxa
UUID
/measurement-sets/IGVFDS0885VFHW/
IGVFDS0885VFHW
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day14_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM3546ITTD/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
fb95a9da-2dd1-4f85-b7b7-4604eea3838f
/measurement-sets/IGVFDS0200DGEO/
IGVFDS0200DGEO
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day0_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM3228TEOC/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
f0e74acb-f52f-4ec1-bcae-6692cfa1c4c5
/measurement-sets/IGVFDS2982RXPU/
IGVFDS2982RXPU
jay-shendure:dev_CRE_mEBs_repA_bulk_RNA_day10_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM1838HBLK/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
dee749f9-5984-4884-8bcd-74d002ccc3fb
/measurement-sets/IGVFDS8920YVYN/
IGVFDS8920YVYN
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day12_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM1576AJXB/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
d9a4a933-5717-48f4-ad6f-636415bfce12
/measurement-sets/IGVFDS9654ACTQ/
IGVFDS9654ACTQ
jay-shendure:dev_CRE_mEBs_repA_bulk_RNA_day16_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM8231RSVA/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
d545c14f-52a8-4d42-8d4c-cc7483eca046
/measurement-sets/IGVFDS1500XNWW/
IGVFDS1500XNWW
jay-shendure:dev_CRE_mEBs_repA_bulk_RNA_day18_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM1019NMFD/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
d06c9bc1-8602-49f2-99ba-0dee0a8166e4
/measurement-sets/IGVFDS0953UCYV/
IGVFDS0953UCYV
jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_RNA_day20_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM3017QZLW/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
c83ecba3-f5b0-44da-9778-d9bb2e5348b5
/measurement-sets/IGVFDS1048UDZS/
IGVFDS1048UDZS
jay-shendure:dev_CRE_mEBs_rep2B_part2_bulk_RNA_day18_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM3379XAQN/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
c5392564-d161-4699-9d61-29bafa313379
/measurement-sets/IGVFDS0792FVAK/
IGVFDS0792FVAK
jay-shendure:dev_CRE_mEBs_rep2B_part2_bulk_RNA_day20_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM1212IBIX/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
bbd38679-2d19-4d55-b502-92097565575b
/measurement-sets/IGVFDS7581EZJY/
IGVFDS7581EZJY
jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_RNA_day18_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM9302LKGG/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
b7e674c9-603f-427f-b4de-f9eaa2c7ddc6
/measurement-sets/IGVFDS6355YALJ/
IGVFDS6355YALJ
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day4_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM5978TPKG/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
b19c57df-7c4f-454e-99f8-c35d8785b9f5
/measurement-sets/IGVFDS7930QJVE/
IGVFDS7930QJVE
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day18_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM2212NOOQ/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
a96b4a33-8e7b-4833-b700-62d9072eea1f
/measurement-sets/IGVFDS7547SYUP/
IGVFDS7547SYUP
jay-shendure:dev_CRE_mEBs_repA_bulk_RNA_day8_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM5894TCUC/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
9968169e-5ab5-4955-b905-565ff7204c53
/measurement-sets/IGVFDS2106RDJT/
IGVFDS2106RDJT
jay-shendure:dev_CRE_mEBs_rep2B_part2_bulk_RNA_day16_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM4092RUKD/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
95b9568a-f9b9-47c2-a3f7-48187f60c0ba
/measurement-sets/IGVFDS8306GNFB/
IGVFDS8306GNFB
jay-shendure:dev_CRE_mEBs_rep2B_part2_bulk_RNA_day12_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM6856KISH/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
93f7a8b5-6716-4c4f-a30e-119a1f217d2b
/measurement-sets/IGVFDS1416HRTP/
IGVFDS1416HRTP
jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_RNA_day12_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM0608PJZS/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
91df1cef-72dd-4fa0-9999-fc6ebb4c4c7c
/measurement-sets/IGVFDS0115ZUKE/
IGVFDS0115ZUKE
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day6_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM0374VHIT/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
9149b734-de72-4926-82f1-67683afd4aa0
/measurement-sets/IGVFDS9342OPKS/
IGVFDS9342OPKS
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day16_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM8780MGRB/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
8eaa35a3-a597-4631-9919-589561efbada
/measurement-sets/IGVFDS2290VBBK/
IGVFDS2290VBBK
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day2_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM8486OPKV/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
8ccfc7a8-a9cf-4e71-8cc9-95dad39904b4
/measurement-sets/IGVFDS6935HPTC/
IGVFDS6935HPTC
jay-shendure:dev_CRE_mEBs_repA_bulk_RNA_day20_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM7918INCH/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
85b1992c-6892-4bf9-a201-c05eb3fab027
/measurement-sets/IGVFDS5335NRCO/
IGVFDS5335NRCO
jay-shendure:dev_CRE_mEBs_rep2B_part2_bulk_RNA_day6_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM5929KNAA/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
82984fcc-c79d-40ea-8a79-cd4363dfac60
/measurement-sets/IGVFDS8101YKZJ/
IGVFDS8101YKZJ
jay-shendure:dev_CRE_mEBs_repA_bulk_RNA_day0_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM0716YPPC/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
7f0df8ed-26d4-48e0-b927-8b414d46c1bc
/measurement-sets/IGVFDS2172PVLM/
IGVFDS2172PVLM
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day8_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM5166XVRM/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
7c423385-cee3-4513-9361-6625e4690141
/measurement-sets/IGVFDS3004XBIY/
IGVFDS3004XBIY
jay-shendure:dev_CRE_mEBs_repB_bulk_RNA_day21_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM7280CZVB/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
78e7fed1-b2df-4f2e-bf4e-2f42808718e8
/measurement-sets/IGVFDS8540VFIL/
IGVFDS8540VFIL
jay-shendure:dev_CRE_mEBs_rep2B_part1_bulk_RNA_day4_reads
/assay-terms/OBI_0002675/
/awards/HG011966/
/rodent-donors/IGVFDO3898MNLZ/
experimental data
/labs/jay-shendure/
MPRA
https://www.protocols.io/file/n92rb7r27.pdf
/in-vitro-systems/IGVFSM3811HZXX/
released
MPRA integrating a reporter library targeting accessible genome regions in many genomic loci
Mus musculus
5ede1c7b-cdb5-4838-b6ea-df1488a9ccdf