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MeasurementSet
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Assay
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in vitro CRISPR screen using single-cell RNA-seq
4
Preferred Assay Title
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Perturb-seq
4
Auxiliary Data
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None
cell hashing barcode sequencing
4
gRNA sequencing
4
Construct Library Data
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guide library
4
Sequencing Platform
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Illumina NovaSeq X Plus
4
input_for
/analysis-sets/IGVFDS2266YDVM/
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UUID
/measurement-sets/IGVFDS7288IQLC/
IGVFDS7288IQLC
gary-hon:differentited_H9_CM_Pilot2_Mini_PB9_LW434
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM8133YEXK/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
f35c3dcd-4cb1-4ace-b641-2bcbaede0b07
/measurement-sets/IGVFDS8751LXWJ/
IGVFDS8751LXWJ
gary-hon:differentited_H9_CM_Pilot2_Mini_PB9_LW433
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM1513DHGW/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
ccc02008-33ed-410c-985c-093695bc06e6
/measurement-sets/IGVFDS8183DTKY/
IGVFDS8183DTKY
gary-hon:differentited_H9_CM_Pilot2_Mini_PB9_LW432
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM3839SOTK/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
a0701133-9f96-49d4-9be2-58c128f40d1f
/measurement-sets/IGVFDS5502LTCL/
IGVFDS5502LTCL
gary-hon:differentited_H9_CM_Pilot2_Mini_PB9_LW431
/assay-terms/OBI_0003660/
/awards/HG011996/
/human-donors/IGVFDO2718IDDQ/
experimental data
/labs/gary-hon/
Perturb-seq
https://www.protocols.io/view/experimental-procedures-for-tf-perturb-seq-ut-sout-denf3dbn
/in-vitro-systems/IGVFSM5829AVCL/
preview
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
Homo sapiens
996c6339-cb2d-4cc0-a783-94c475fd0382