cell by gene in raw feature barcode matrix

multiplexed sample: Homo sapiens (male) Jurkat cell line treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; Homo sapiens (female) K562 cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples

Treatment of 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours

Treatment of 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours

single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)

Ansuman Satpathy, Stanford

Accession

Alternate Accessions

Assembly

Content Summary

Content Type

External Identifiers

File Format

File Set

File Set @Type

Illumina Read Type

Reference Files

Seqspec Of

Status

Summary

Transcriptome Annotation

Upload Status

UUID

Object Type

Data Use Limitation

File Size

File Set Type

Preferred Assay Title

Taxa

Sample

Classification

Modification

Treatment

Workflow

Uniformly Processed

Award

derived_from

Report