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IGVF_catalog_beta_v0.3
46 items
IGVFDS0056MEON
  • igvf:igvf_catalog_beta_v0.1_adastra_allele_specific_binding
GRCh38
ADASTRA allele-specific binding events
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
f981e985-56b9-41ce-bfa1-ee00f7cdaee9
IGVFDS5898ZDNL
  • igvf:igvf_catalog_beta_v0.1_ensembl_genes
GRCh38
ENSEMBL genes with NCBI alias mappings
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
f327cbb3-d3c8-47b3-b3f1-aaf06603cf30
IGVFDS8678JUTA
  • igvf:igvf_catalog_beta_v0.1_uniprot
GRCh38
Uniprot
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
ee77b5f8-8db9-41f8-8d7f-6eda9bb219d9
IGVFDS5645BMIY
  • igvf:igvf_catalog_beta_v0.1_mouse_encode_ccre
GRCm39, mm10
Mouse ENCODE cCRE
external data for catalog
released
Mus musculus GRCm39 mm10 external data for catalog
Mus musculus
eb9bad34-9bb4-4ab2-b3c6-da3ab10b6228
IGVFDS1193SOYF
  • igvf:igvf_catalog_beta_v0.1_orphanet
GRCh38
Orphanet disease genes collection
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
e4190fda-a9d0-4991-af77-22ce809f24be
IGVFDS0756KPYR
  • igvf:igvf_catalog_beta_v0.1_encode_v4_cell_type_agnostic_ccres
GRCh38
ENCODE v4 cell-type agnostic cCREs
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
df98ec1d-4060-42c1-b015-e5ccaa93d466
IGVFDS8793NHEL
  • igvf:igvf_catalog_beta_v0.1_encode_mpra
GRCh38
MPRA tested regulatory elements
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
db63a466-ff76-4688-ac06-7670178bf97f
IGVFDS3257FDZW
  • igvf:igvf_catalog_beta_v0.1_go_annotations
GRCh38
GO annotations (GO term->gene links)
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d759ec85-f4b3-4242-92ea-7e83ebf9a111
IGVFDS9088SLTK
  • igvf:igvf_catalog_beta_v0.1_orphanet_ontologies
GRCh38
ORPHANET ontologies
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d222dec3-d728-45ac-b145-25f7c50f1356
IGVFDS1759WTEV
  • igvf:igvf_catalog_beta_v0.3_Y2AVE_project
GRCh38
Y2AVE variants
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d0982256-06a8-4839-9356-ddcc4ebf28aa
IGVFDS0491JHHV
  • igvf:igvf_catalog_beta_v0.1_UKB-PPP_gwas_studies
GRCh38
UKB-PPP gwas studies
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c82d69ac-5c36-442b-a960-b411c76458de
IGVFDS9934ZYJM
  • igvf:igvf_catalog_beta_v0.1_gtex_eqtls
GRCh38
GTEx eQTLs
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c7e2176c-e10f-4d53-bb63-45e8778d17c2
IGVFDS7295JLJQ
  • igvf:igvf_catalog_beta_v0.1_mondo_ontologies
GRCh38
MONDO ontologies
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c2713f0d-c9c0-41be-8ce2-a36b9131b482
IGVFDS6815UTNH
  • igvf:igvf_catalog_beta_v0.1_mouse_human_element
mouse-human element
external data for catalog
released
Mus musculus external data for catalog
Mus musculus
c01e5490-235a-4a4c-b704-286175b43e58
IGVFDS3738IOGO
  • igvf:igvf_catalog_beta_v0.1_protein_complex_EBI
protein complex from EBI complex portal
external data for catalog
released
Homo sapiens external data for catalog
Homo sapiens
bf88eaa2-59c4-441d-be24-e797bb482ddf
IGVFDS4757VBVY
  • igvf:igvf_catalog_beta_v0.1_gvatdb_allele_specific_binding
GRCh38
GVATdb allele-specific TF binding calls
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
b5c91525-6961-4757-b298-0f184e10c728
IGVFDS2588RYXK
  • igvf:igvf_catalog_beta_v0.1_cl_ontologies
GRCh38
CL ontologies
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
afdc50c6-eb5a-4d9d-9f5c-c969277bb5e2
IGVFDS1845GNZG
  • igvf:igvf_catalog_beta_v0.1_reactome_pathways
pathways from reactome into catalog
external data for catalog
released
Homo sapiens external data for catalog
Homo sapiens
ac337ccc-38e4-47c1-9a6d-cbb8b2795bf7
IGVFDS3509VPYM
  • igvf:igvf_catalog_beta_v0.1_pharm_gkb_variant_drug_effects
pharmGKB variant-drug effect edges
external data for catalog
released
Homo sapiens external data for catalog
Homo sapiens
a7035d69-576f-426b-9680-ab67ba8c890e
IGVFDS1791VARB
  • igvf:igvf_catalog_beta_v0.1_encode_e2g_hyper_hyper_edges_dnase_only
GRCh38
Encode E2G hyper- and hyper-hyper- edges (ENCODE-E2G-DNaseOnly)
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
9c1ea23e-2d97-4748-b644-ad5047f5428b
IGVFDS5350TOZO
  • igvf:igvf_catalog_beta_v0.1_hpo_ontologies
GRCh38
HPO ontologies
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
98603378-5777-49d2-8a77-1374861918a4
IGVFDS9533QBAK
  • igvf:igvf_catalog_beta_v0.1_mouse_go_annotations
Mouse GO annotations
external data for catalog
released
Mus musculus external data for catalog
Mus musculus
9135a7a1-3baf-4610-8fb5-9aa6bbe2dd62
IGVFDS9319PNTG
  • igvf:igvf_catalog_beta_v0.1_hocomoco_tf_binding_motifs
HOCOMOCO TF binding motifs and link to proteins
external data for catalog
released
Homo sapiens external data for catalog
Homo sapiens
8bf1f881-3c69-4dcb-a168-508f0546d979
IGVFDS0745SKQZ
  • igvf:igvf_catalog_beta_v0.1_oncotree_cancer_classification_to_ncit
GRCh38
Oncotree cancer classification nodes and mappings to NCIT
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
86c43435-1ff3-4d37-849c-4240f1300f5d
IGVFDS2035XPMB
  • igvf:igvf_catalog_beta_v0.1_uberon_ontologies
GRCh38
Uberon ontologies
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
802d2daf-f9ba-4309-a8ba-b1ae2d1fb474