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Homo sapiens
39
Mus musculus
5
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external data for catalog
44
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GRCh38
33
GRCm39
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mm10
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IGVF_catalog_beta_v0.2
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File Set Type
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Taxa
Transcriptome Annotations
UUID
/curated-sets/IGVFDS0056MEON/
IGVFDS0056MEON
igvf:igvf_catalog_beta_v0.1_adastra_allele_specific_binding
GRCh38
/awards/Community/
ADASTRA allele-specific binding events
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
f981e985-56b9-41ce-bfa1-ee00f7cdaee9
/curated-sets/IGVFDS5898ZDNL/
IGVFDS5898ZDNL
igvf:igvf_catalog_beta_v0.1_ensembl_genes
GRCh38
/awards/Community/
ENSEMBL genes with NCBI alias mappings
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
f327cbb3-d3c8-47b3-b3f1-aaf06603cf30
/curated-sets/IGVFDS8678JUTA/
IGVFDS8678JUTA
igvf:igvf_catalog_beta_v0.1_uniprot
GRCh38
/awards/Community/
Uniprot
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
ee77b5f8-8db9-41f8-8d7f-6eda9bb219d9
/curated-sets/IGVFDS5645BMIY/
IGVFDS5645BMIY
igvf:igvf_catalog_beta_v0.1_mouse_encode_ccre
GRCm39, mm10
/awards/Community/
Mouse ENCODE cCRE
external data for catalog
/labs/community/
released
Mus musculus GRCm39 mm10 external data for catalog
Mus musculus
eb9bad34-9bb4-4ab2-b3c6-da3ab10b6228
/curated-sets/IGVFDS1193SOYF/
IGVFDS1193SOYF
igvf:igvf_catalog_beta_v0.1_orphanet
GRCh38
/awards/Community/
Orphanet disease genes collection
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
e4190fda-a9d0-4991-af77-22ce809f24be
/curated-sets/IGVFDS0756KPYR/
IGVFDS0756KPYR
igvf:igvf_catalog_beta_v0.1_encode_v4_cell_type_agnostic_ccres
GRCh38
/awards/Community/
ENCODE v4 cell-type agnostic cCREs
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
df98ec1d-4060-42c1-b015-e5ccaa93d466
/curated-sets/IGVFDS8793NHEL/
IGVFDS8793NHEL
igvf:igvf_catalog_beta_v0.1_encode_mpra
GRCh38
/awards/Community/
MPRA tested regulatory elements
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
db63a466-ff76-4688-ac06-7670178bf97f
/curated-sets/IGVFDS3257FDZW/
IGVFDS3257FDZW
igvf:igvf_catalog_beta_v0.1_go_annotations
GRCh38
/awards/Community/
GO annotations (GO term->gene links)
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d759ec85-f4b3-4242-92ea-7e83ebf9a111
/curated-sets/IGVFDS9088SLTK/
IGVFDS9088SLTK
igvf:igvf_catalog_beta_v0.1_orphanet_ontologies
GRCh38
/awards/Community/
ORPHANET ontologies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
d222dec3-d728-45ac-b145-25f7c50f1356
/curated-sets/IGVFDS0491JHHV/
IGVFDS0491JHHV
igvf:igvf_catalog_beta_v0.1_UKB-PPP_gwas_studies
GRCh38
/awards/Community/
UKB-PPP gwas studies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c82d69ac-5c36-442b-a960-b411c76458de
/curated-sets/IGVFDS9934ZYJM/
IGVFDS9934ZYJM
igvf:igvf_catalog_beta_v0.1_gtex_eqtls
GRCh38
/awards/Community/
GTEx eQTLs
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c7e2176c-e10f-4d53-bb63-45e8778d17c2
/curated-sets/IGVFDS7295JLJQ/
IGVFDS7295JLJQ
igvf:igvf_catalog_beta_v0.1_mondo_ontologies
GRCh38
/awards/Community/
MONDO ontologies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
c2713f0d-c9c0-41be-8ce2-a36b9131b482
/curated-sets/IGVFDS6815UTNH/
IGVFDS6815UTNH
igvf:igvf_catalog_beta_v0.1_mouse_human_element
/awards/Community/
mouse-human element
external data for catalog
/labs/community/
released
Mus musculus external data for catalog
Mus musculus
c01e5490-235a-4a4c-b704-286175b43e58
/curated-sets/IGVFDS3738IOGO/
IGVFDS3738IOGO
igvf:igvf_catalog_beta_v0.1_protein_complex_EBI
/awards/Community/
protein complex from EBI complex portal
external data for catalog
/labs/community/
released
Homo sapiens external data for catalog
Homo sapiens
bf88eaa2-59c4-441d-be24-e797bb482ddf
/curated-sets/IGVFDS4757VBVY/
IGVFDS4757VBVY
igvf:igvf_catalog_beta_v0.1_gvatdb_allele_specific_binding
GRCh38
/awards/Community/
GVATdb allele-specific TF binding calls
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
b5c91525-6961-4757-b298-0f184e10c728
/curated-sets/IGVFDS2588RYXK/
IGVFDS2588RYXK
igvf:igvf_catalog_beta_v0.1_cl_ontologies
GRCh38
/awards/Community/
CL ontologies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
afdc50c6-eb5a-4d9d-9f5c-c969277bb5e2
/curated-sets/IGVFDS1845GNZG/
IGVFDS1845GNZG
igvf:igvf_catalog_beta_v0.1_reactome_pathways
/awards/Community/
pathways from reactome into catalog
external data for catalog
/labs/community/
released
Homo sapiens external data for catalog
Homo sapiens
ac337ccc-38e4-47c1-9a6d-cbb8b2795bf7
/curated-sets/IGVFDS3509VPYM/
IGVFDS3509VPYM
igvf:igvf_catalog_beta_v0.1_pharm_gkb_variant_drug_effects
/awards/Community/
pharmGKB variant-drug effect edges
external data for catalog
/labs/community/
released
Homo sapiens external data for catalog
Homo sapiens
a7035d69-576f-426b-9680-ab67ba8c890e
/curated-sets/IGVFDS1791VARB/
IGVFDS1791VARB
igvf:igvf_catalog_beta_v0.1_encode_e2g_hyper_hyper_edges_dnase_only
GRCh38
/awards/Community/
Encode E2G hyper- and hyper-hyper- edges (ENCODE-E2G-DNaseOnly)
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
9c1ea23e-2d97-4748-b644-ad5047f5428b
/curated-sets/IGVFDS5350TOZO/
IGVFDS5350TOZO
igvf:igvf_catalog_beta_v0.1_hpo_ontologies
GRCh38
/awards/Community/
HPO ontologies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
98603378-5777-49d2-8a77-1374861918a4
/curated-sets/IGVFDS9533QBAK/
IGVFDS9533QBAK
igvf:igvf_catalog_beta_v0.1_mouse_go_annotations
/awards/Community/
Mouse GO annotations
external data for catalog
/labs/community/
released
Mus musculus external data for catalog
Mus musculus
9135a7a1-3baf-4610-8fb5-9aa6bbe2dd62
/curated-sets/IGVFDS9319PNTG/
IGVFDS9319PNTG
igvf:igvf_catalog_beta_v0.1_hocomoco_tf_binding_motifs
/awards/Community/
HOCOMOCO TF binding motifs and link to proteins
external data for catalog
/labs/community/
released
Homo sapiens external data for catalog
Homo sapiens
8bf1f881-3c69-4dcb-a168-508f0546d979
/curated-sets/IGVFDS0745SKQZ/
IGVFDS0745SKQZ
igvf:igvf_catalog_beta_v0.1_oncotree_cancer_classification_to_ncit
GRCh38
/awards/Community/
Oncotree cancer classification nodes and mappings to NCIT
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
86c43435-1ff3-4d37-849c-4240f1300f5d
/curated-sets/IGVFDS2035XPMB/
IGVFDS2035XPMB
igvf:igvf_catalog_beta_v0.1_uberon_ontologies
GRCh38
/awards/Community/
Uberon ontologies
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
802d2daf-f9ba-4309-a8ba-b1ae2d1fb474
/curated-sets/IGVFDS7045IBKT/
IGVFDS7045IBKT
igvf:igvf_catalog_beta_v0.1_topld
GRCh38
/awards/Community/
TopLD database for variants_variants correlations for 4 ancestry groups
external data for catalog
/labs/community/
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
7a1476c3-dcfa-40f7-8601-f192551e3643