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File Set Type

Assemblies

Taxa

8 items
IGVFDS5645BMIY
  • igvf:igvf_catalog_beta_v0.1_mouse_encode_ccre
GRCm39, mm10
Mouse ENCODE cCRE
external data for catalog
released
Mus musculus GRCm39 mm10 external data for catalog
Mus musculus
eb9bad34-9bb4-4ab2-b3c6-da3ab10b6228
IGVFDS8793NHEL
  • igvf:igvf_catalog_beta_v0.1_encode_mpra
GRCh38
MPRA tested regulatory elements
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
db63a466-ff76-4688-ac06-7670178bf97f
IGVFDS6815UTNH
  • igvf:igvf_catalog_beta_v0.1_mouse_human_element
mouse-human element
external data for catalog
released
Mus musculus external data for catalog
Mus musculus
c01e5490-235a-4a4c-b704-286175b43e58
IGVFDS1791VARB
  • igvf:igvf_catalog_beta_v0.1_encode_e2g_hyper_hyper_edges_dnase_only
GRCh38
Encode E2G hyper- and hyper-hyper- edges (ENCODE-E2G-DNaseOnly)
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
9c1ea23e-2d97-4748-b644-ad5047f5428b
IGVFDS1922ZNEM
  • igvf:igvf_catalog_beta_v0.1_caqtls
GRCh38
caQTLs
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
77dd99ae-8bc5-48c7-b935-059ec4705394
IGVFDS8501OFOY
  • igvf:igvf_catalog_beta_v0.1_encode_e2g_hyper_hyper_edges_e2g_full
GRCh38
Encode E2G hyper- and hyper-hyper- edges (ENCODE-E2G-Full)
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
48d4acc1-4927-4671-be9d-53a84d653589
IGVFDS5514HTXN
  • igvf:igvf_catalog_beta_v0.3_distal_regulation_combined_crispr_data
  • igvf:ENCSR998YDI
GRCh38
Combined CRISPR dataset created from harmonizing data from Nasser et al., 2021, Gasperini et al., 2019 and Schraivogel et al., 2020
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
13e10485-bcf6-41b6-ad6a-09261a17af84
IGVFDS9562WBTQ
  • igvf:igvf_catalog_beta_v0.1_epiraction_enhancer_gene_links
GRCh38
Epiraction enhancer gene links
external data for catalog
released
Homo sapiens GRCh38 external data for catalog
Homo sapiens
120d482f-a20c-4dfa-a091-4ba87b3e7eef