IGVF

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Assay

in vitro CRISPR screen using flow cytometry
1

Preferred Assay Title

CRISPR FlowFISH screen
1

Auxiliary Data

cell sorting
1
gRNA sequencing
1

Construct Library Data

guide library
1

Readout Genes

MYC
1

auxiliary_sets.@id

/auxiliary-sets/IGVFDS4894APIT/

1 item

/measurement-sets/IGVFDS2690TTFH/

IGVFDS2690TTFH

jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR1_Rep1_S114
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR1_Rep2_S169
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR2_Rep1_S120
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR2_Rep2_S175
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR3_Rep1_S126
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR3_Rep2_S181
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR4_Rep1_S132
jesse-engreitz:measurement_CRUDO_MYC-Auxin6hrs-FF1-BinD-PCR4_Rep2_S187

MYC

/assay-terms/OBI_0003661/

/awards/HG011972/

/human-donors/IGVFDO0384OZRW/

experimental data

/labs/jesse-engreitz/

CRISPR FlowFISH screen

https://www.protocols.io/view/crispri-of-regulatory-elements-upon-degron-operati-5jyl82d59l2w/v1

/in-vitro-systems/IGVFSM0373CYTT/

released

mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

Homo sapiens

2054038e-8d83-4442-af43-bf9a70e30042