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209853 items
ENTREZ:727682, HGNC:20176
TAB3-AS1
TAB3 antisense RNA 1
ENSG00000231542
released
TAB3-AS1 - ENSG00000231542 (Homo sapiens)
CXorf29, TAB3 antisense RNA 1 (non-protein coding), TAB3 antisense RNA 1, TAB3-AS1
Homo sapiens
TAB3-AS1 (Homo sapiens)
GENCODE 43
fffff47f-ff62-484e-ac05-77a11819a292
HGNC:30148, ENTREZ:100506898
MAGOH2P
mago homolog 2, pseudogene
ENSG00000264176
released
MAGOH2P - ENSG00000264176 (Homo sapiens)
mago-nashi homolog, proliferation-associated pseudogene, mago-nashi homolog 2, proliferation-associated, MAGOH2P, MAGOH2, mago-nashi homolog 2 (pseudogene), mago homolog 2, pseudogene
Homo sapiens
MAGOH2P (Homo sapiens)
GENCODE 43
ffff7cfe-c85d-4d6d-aae0-ef9ecd5c30e3
ENSMUSG00000139860
ENSMUSG00000139860
released
ENSMUSG00000139860 - ENSMUSG00000139860 (Mus musculus)
Mus musculus
ENSMUSG00000139860 (Mus musculus)
GENCODE M36
fffee7c7-56f3-465e-adcb-2d177cafd48f
HGNC:32802, ENTREZ:693131
MIR548D2
microRNA 548d-2
ENSG00000263690
released
MIR548D2 - ENSG00000263690 (Homo sapiens)
microRNA 548d-2, MIR548D2, hsa-mir-548d-2, MIRN548D2
Homo sapiens
MIR548D2 (Homo sapiens)
GENCODE 43
fffe6446-8319-4a90-8186-72f5e73e99d4
HGNC:49028, ENTREZ:105370308
LINC01040
long intergenic non-protein coding RNA 1040
ENSG00000226037
released
LINC01040 - ENSG00000226037 (Homo sapiens)
LINC01040, long intergenic non-protein coding RNA 1040, TCONS_00021682
Homo sapiens
LINC01040 (Homo sapiens)
GENCODE 43
fffe353f-cdc8-4f27-91a3-e05f1db66ede
MGI:5011064, ENTREZ:100417884
Gm18879
predicted gene, 18879
ENSMUSG00000113624
released
Gm18879 - ENSMUSG00000113624 (Mus musculus)
predicted gene, 18879, Gm18879
Mus musculus
Gm18879 (Mus musculus)
GENCODE M36
fffdac69-14a1-4303-90c4-4492fd1ad751
MGI:6098084
Gm48539
ENSMUSG00000113734
released
Gm48539 - ENSMUSG00000113734 (Mus musculus)
Mus musculus
Gm48539 (Mus musculus)
GENCODE M36
fffda13a-c0d1-4016-a8f0-d90842ad0641
IGVFFI4067OVRO
  • jesse-engreitz:sequence_file-teloHAEC_2kG_library-NovaSeq2-scRNAseq_2kG_11AMDox_6_a_CGTTAATC_L001_I1_001.fastq.gz
Perturb-seq
functional characterization
reads
false
fastq
MeasurementSet, FileSet, Item
I1
Jesse Engreitz, Stanford
preview
I1 reads from sequencing run 1
validated
fffd6818-0b3a-4ca9-8ecb-116409891eb5
ENTREZ:406921, HGNC:31516
MIR132
microRNA 132
ENSG00000267200
released
MIR132 - ENSG00000267200 (Homo sapiens)
miRNA132, MIRN132, hsa-mir-132, mir-132, microRNA 132, MIR132
Homo sapiens
MIR132 (Homo sapiens)
GENCODE 43
fffd5c03-28f4-4ce1-bbf7-240cb4865536
IGVFSM7625QSBF
  • igvf:corces_tissue_BANN1570_SN
mapping
tissue
2022-10-07
Ryan Corces, Gladstone Institute UCSF
male
preview
Homo sapiens (male, 73 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
Homo sapiens
fffd06f2-f8bc-42a4-8e97-3598debec36c
false
IGVFFI1165AJSO
  • jesse-engreitz:220829_8merInsertion-Jurkat_Stimulation-Amp_PPIF_promoter-BioRep2-FFrep1-BinD-PCRrep1_I2
Variant-EFFECTS
functional characterization
reads
false
fastq
MeasurementSet, FileSet, Item
I2
Jesse Engreitz, Stanford
released
I2 reads from sequencing run 1
validated
fffcd64e-af02-4675-8953-7352459ee06a
IGVFFI0251HKHB
  • buenrostro-bernstein:SS-LS_1012_barcode
SHARE-seq
mapping
reads
true
fastq
MeasurementSet, FileSet, Item
I1
Jason Buenrostro, Broad
released
I1 reads from sequencing run 1012
validated
fffcb6be-ec47-4790-8759-8636e5dca2ec
IGVFFI5702NMGS
  • igvf:corces_sequenceFile_ATAC_RP014_G6_P061_L002_I1
10x multiome
mapping
reads
false
fastq
MeasurementSet, FileSet, Item
I1
Ryan Corces, Gladstone Institute UCSF
preview
I1 reads from sequencing run 1
validated
fffcb4f3-cb23-4ce0-9f42-5f682645ceac
MGI:3780579, ENTREZ:100039764
Gm2412
predicted gene 2412
ENSMUSG00000112186
released
Gm2412 - ENSMUSG00000112186 (Mus musculus)
Gm2412, predicted gene 2412
Mus musculus
Gm2412 (Mus musculus)
GENCODE M36
fffc86a4-d421-4876-93e1-5019b80dcbb7
MGI:2138935, ENTREZ:98952
Eeig1
estrogen-induced osteoclastogenesis regulator 1
ENSMUSG00000039157
released
Eeig1 - ENSMUSG00000039157 (Mus musculus)
estrogen-induced osteoclastogenesis regulator 1, Fam102a, family with sequence similarity 102, member A, Eeig1, C230093N12Rik, protein FAM102A, early estrogen-induced gene 1 protein
Mus musculus
Eeig1 (Mus musculus)
GENCODE M36
fffc7849-061f-42a0-a240-c47d142f5d95
ENSMUSG00000122270
ENSMUSG00000122270
released
ENSMUSG00000122270 - ENSMUSG00000122270 (Mus musculus)
Mus musculus
ENSMUSG00000122270 (Mus musculus)
GENCODE M36
fffbedaa-62d7-4ca1-ad2a-bbb1db911baa
MGI:1925120, ENTREZ:77870
E130116L18Rik
RIKEN cDNA E130116L18 gene
ENSMUSG00000054116
released
E130116L18Rik - ENSMUSG00000054116 (Mus musculus)
uncharacterized protein LOC77870, RIKEN cDNA E130116L18 gene, E130116L18Rik
Mus musculus
E130116L18Rik (Mus musculus)
GENCODE M36
fffbc491-f63d-4d49-9581-0539aa3dae46
ENTREZ:100126316, HGNC:33663
MIR873
microRNA 873
ENSG00000215939
released
MIR873 - ENSG00000215939 (Homo sapiens)
mir-873, hsa-mir-873, MIRN873, MIR873, microRNA 873
Homo sapiens
MIR873 (Homo sapiens)
GENCODE 43
fffbab02-5b0f-4c1d-8112-effd0ed79947
IGVFFI5092EVUK
Parse SPLiT-seq
mapping
cell by gene in sparse gene count matrix
sparse gene count matrix
tar
AnalysisSet, FileSet, Item
Ali Mortazavi, UCI
released
cell by gene in sparse gene count matrix
validated
fffb8b1b-b1e2-475b-874a-d672c3387c1d
MGI:1913364, ENTREZ:66114
Dnajc30
DnaJ heat shock protein family (Hsp40) member C30
ENSMUSG00000061118
released
Dnajc30 - ENSMUSG00000061118 (Mus musculus)
DnaJ (Hsp40) homolog, subfamily C, member 30, Wbscr18, Dnajc30, dnaJ homolog subfamily C member 30, mitochondrial, DnaJ heat shock protein family (Hsp40) member C30, 1300007M11Rik, Williams-Beuren syndrome chromosome region 18 homolog, Williams-Beuren syndrome critical region 18, williams-Beuren syndrome chromosomal region 18 protein homolog
Mus musculus
Dnajc30 (Mus musculus)
GENCODE M36
fffb1c09-7c0d-4fff-8bf8-2a43885b61ba
ENTREZ:147804, HGNC:44142
TPM3P9
tropomyosin 3 pseudogene 9
ENSG00000241015
released
TPM3P9 - ENSG00000241015 (Homo sapiens)
tropomyosin 3 pseudogene 9, TPM3P9
Homo sapiens
TPM3P9 (Homo sapiens)
GENCODE 43
fffa90ee-e1b7-4c20-833b-38e94dcc8cb5
IGVFFI4344XJCA
  • leif-ludwig:measurement2308429016_scRNA_R2_003
mtscMultiome
mapping
reads
true
fastq
MeasurementSet, FileSet, Item
R2
Leif Ludwig, MDC
preview
R2 reads from sequencing run 1
validated
fffa8b68-f3b7-4e90-9fff-941e4362b2b8
ENTREZ:643232, HGNC:44606
NRBF2P3
nuclear receptor binding factor 2 pseudogene 3
ENSG00000237415
released
NRBF2P3 - ENSG00000237415 (Homo sapiens)
nuclear receptor binding factor 2 pseudogene 3, NRBF2P3
Homo sapiens
NRBF2P3 (Homo sapiens)
GENCODE 43
fff99b1c-eff4-41be-aca7-24ef99859926
IGVFFI5723DRHI
  • ansuman-satpathy:igvf_exp16_multi_10x4_NGS2_r1
10x multiome with MULTI-seq
mapping
reads
true
fastq
AuxiliarySet, FileSet, Item
R1
Ansuman Satpathy, Stanford
released
R1 reads from sequencing run 1
validated
fff94f52-8117-4233-a4c3-68f27ef9e17f
ENSMUSG00000126785
ENSMUSG00000126785
released
ENSMUSG00000126785 - ENSMUSG00000126785 (Mus musculus)
Mus musculus
ENSMUSG00000126785 (Mus musculus)
GENCODE M36
fff93944-13c3-4369-94c7-04b8876e788c